Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,417,765	-		DDA3937_RS06345	0.19	-0.5
1,417,787	-		DDA3937_RS06345	0.21	-1.9
1,417,842	+		DDA3937_RS06345	0.28	+1.8
1,417,843	-		DDA3937_RS06345	0.29	-0.5
1,417,867	+		DDA3937_RS06345	0.32	+0.6
1,417,867	+		DDA3937_RS06345	0.32	+0.2
1,417,868	-		DDA3937_RS06345	0.32	+0.3
1,418,000	-		DDA3937_RS06345	0.49	+1.2
1,418,000	-		DDA3937_RS06345	0.49	-0.2
1,418,027	+		DDA3937_RS06345	0.52	-2.1
1,418,027	+		DDA3937_RS06345	0.52	-1.5
1,418,027	+		DDA3937_RS06345	0.52	+0.9
1,418,028	-		DDA3937_RS06345	0.52	+0.5
1,418,028	-		DDA3937_RS06345	0.52	+0.5
1,418,028	-		DDA3937_RS06345	0.52	-0.2
1,418,028	-		DDA3937_RS06345	0.52	-0.8
1,418,199	+		DDA3937_RS06345	0.74	-0.2
1,418,257	+		DDA3937_RS06345	0.81	+0.8
1,418,258	-		DDA3937_RS06345	0.82	-0.0
1,418,258	-		DDA3937_RS06345	0.82	-0.9
1,418,326	+				+1.3
1,418,326	+				-0.6
1,418,326	+				-0.5
1,418,326	+				-0.8
1,418,376	+				-0.2
1,418,376	+				-1.1
1,418,420	-				-0.8
1,418,424	+				+0.2
1,418,458	+				-2.1
1,418,459	-				-1.0
1,418,512	+				+1.0
1,418,512	+				+0.4
1,418,513	-				-0.7
1,418,541	-				-0.9
1,418,591	+				-0.4
1,418,592	-				-1.3
1,418,592	-				-0.2
1,418,599	-				+0.9
1,418,600	+				+0.5
1,418,601	-				+0.1
1,418,601	-				-1.1
1,418,601	-				+0.7
1,418,619	-				+0.5
1,418,619	-				-1.1
1,418,634	+				-0.1
1,418,635	-				-2.8
1,418,682	+				-3.0
1,418,682	+				-0.5
1,418,682	+				-0.5
1,418,683	-				-2.3
1,418,877	+		DDA3937_RS06350	0.43	-0.8
1,418,917	+		DDA3937_RS06350	0.50	-0.8
1,418,918	-		DDA3937_RS06350	0.51	-0.3
1,418,918	-		DDA3937_RS06350	0.51	-0.5
1,418,995	-		DDA3937_RS06350	0.65	-1.6
1,419,014	+		DDA3937_RS06350	0.69	-0.5
1,419,014	+		DDA3937_RS06350	0.69	-1.1
1,419,014	+				-1.5
1,419,014	+		DDA3937_RS06350	0.69	-0.1
1,419,015	-		DDA3937_RS06350	0.69	-2.9
1,419,015	-		DDA3937_RS06350	0.69	-1.6
1,419,120	+		DDA3937_RS06350	0.88	-0.1
1,419,120	+		DDA3937_RS06350	0.88	-1.1
1,419,121	-		DDA3937_RS06350	0.88	-1.5
1,419,121	-				-0.5
1,419,121	-				-1.1
1,419,180	+				-1.2
1,419,180	+				+0.7
1,419,180	+				+0.7
1,419,180	+				-0.1
1,419,180	+				+0.7
1,419,180	+				-0.7
1,419,214	-				-0.1
1,419,237	+				+0.2
1,419,238	-				+0.3
1,419,238	-				+0.0
1,419,254	+				-1.9
1,419,255	-				+0.3
1,419,255	-				-0.5
1,419,283	+				-1.7
1,419,286	+				+0.2
1,419,286	+				-0.1
1,419,286	+				-0.1
1,419,286	+				+0.0
1,419,286	+				+0.2
1,419,286	+				+0.8
1,419,286	+				+0.3
1,419,286	+				-0.1
1,419,286	+				-0.6
1,419,286	+				-1.6
1,419,287	-				+1.7
1,419,287	-				+0.8
1,419,287	-				-0.6
1,419,287	-				+0.5
1,419,287	-				+0.7
1,419,287	-				-0.8
1,419,287	-				+0.1
1,419,287	-				+0.1
1,419,287	-				+0.2
1,419,287	-				-1.3
1,419,287	-				-0.0
1,419,387	+		DDA3937_RS06355	0.11	-0.8
1,419,451	+		DDA3937_RS06355	0.15	+0.1
1,419,451	+		DDA3937_RS06355	0.15	-1.2
1,419,452	-		DDA3937_RS06355	0.15	+0.2
1,419,493	-		DDA3937_RS06355	0.17	-1.7
1,419,598	-		DDA3937_RS06355	0.24	+0.3
1,419,636	+		DDA3937_RS06355	0.26	+0.2
1,419,676	+		DDA3937_RS06355	0.28	-0.0
1,419,739	-		DDA3937_RS06355	0.32	+0.2
1,419,838	+		DDA3937_RS06355	0.38	+0.3
1,419,838	+		DDA3937_RS06355	0.38	+2.5
1,419,839	-		DDA3937_RS06355	0.38	-0.8
1,419,839	-		DDA3937_RS06355	0.38	-0.5
1,419,935	-		DDA3937_RS06355	0.44	+0.5
1,419,965	+		DDA3937_RS06355	0.46	-0.7
1,419,966	-				+0.5
1,419,966	-		DDA3937_RS06355	0.46	-0.8
1,419,966	-		DDA3937_RS06355	0.46	-0.1
1,420,126	+		DDA3937_RS06355	0.56	-0.1
1,420,177	+		DDA3937_RS06355	0.59	+0.8
1,420,177	+		DDA3937_RS06355	0.59	+0.2
1,420,178	-		DDA3937_RS06355	0.59	+0.2