Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06100

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,371,072	+		DDA3937_RS06090	0.24	-1.8
1,371,072	+		DDA3937_RS06090	0.24	-0.7
1,371,072	+		DDA3937_RS06090	0.24	-1.2
1,371,072	+		DDA3937_RS06090	0.24	+0.3
1,371,105	-		DDA3937_RS06090	0.29	-0.6
1,371,113	+		DDA3937_RS06090	0.30	+0.6
1,371,113	+		DDA3937_RS06090	0.30	-0.6
1,371,150	+		DDA3937_RS06090	0.36	+0.4
1,371,246	+		DDA3937_RS06090	0.50	-0.5
1,371,246	+		DDA3937_RS06090	0.50	-0.2
1,371,246	+		DDA3937_RS06090	0.50	-0.6
1,371,247	-		DDA3937_RS06090	0.50	+1.0
1,371,247	-		DDA3937_RS06090	0.50	-0.6
1,371,523	+				-1.0
1,371,523	+				-0.4
1,371,523	+				-0.2
1,371,523	+				-1.1
1,371,523	+				-0.2
1,371,524	-				+0.4
1,371,524	-				-0.6
1,371,524	-				+0.3
1,371,524	-				+0.6
1,371,524	-				-1.0
1,371,524	-				+0.4
1,371,524	-				-0.2
1,371,524	-				-0.4
1,371,524	-				-0.6
1,371,531	+				-0.3
1,371,532	-				+0.9
1,371,617	+				-1.0
1,371,617	+				-0.1
1,371,618	-				+1.0
1,371,618	-				-1.4
1,371,650	+				-1.0
1,371,650	+				-1.0
1,371,651	-				-0.4
1,371,652	+				+0.4
1,371,760	+		DDA3937_RS06095	0.25	-0.6
1,371,760	+		DDA3937_RS06095	0.25	-1.4
1,371,761	-		DDA3937_RS06095	0.25	+0.8
1,371,809	-		DDA3937_RS06095	0.51	+0.3
1,371,869	+		DDA3937_RS06095	0.83	-3.3
1,371,869	+		DDA3937_RS06095	0.83	+0.0
1,371,870	-		DDA3937_RS06095	0.83	-0.4
1,371,870	-		DDA3937_RS06095	0.83	-0.2
1,371,870	-		DDA3937_RS06095	0.83	-0.1
1,371,870	-		DDA3937_RS06095	0.83	-0.4
1,371,883	-				+1.9
1,371,914	+				-0.7
1,371,914	+				-0.1
1,371,915	-				-0.3
1,371,915	-				-0.4
1,371,917	+				+0.8
1,371,917	+				+0.1
1,371,917	+				+1.0
1,371,917	+				-1.2
1,371,917	+				+1.8
1,371,918	-				+0.2
1,371,918	-				+0.3
1,371,918	-				-1.6
1,371,918	-				-0.6
1,371,918	-				-0.9
1,371,918	-				-0.9
1,371,919	+				+2.1
1,371,919	+				+0.5
1,371,919	+				+0.6
1,371,919	+				-0.9
1,371,919	+				+0.0
1,371,919	+				-0.7
1,371,919	+				-1.0
1,371,919	+				-1.2
1,371,919	+				-1.6
1,371,919	+				+0.6
1,371,919	+				-0.2
1,371,919	+				+0.5
1,371,919	+				-1.2
1,371,919	+				+0.1
1,371,919	+				-1.4
1,371,919	+				-1.9
1,371,919	+				-1.1
1,371,919	+				-0.6
1,371,919	+				+0.4
1,371,919	+				-0.4
1,371,919	+				+0.2
1,371,920	-				+1.6
1,371,920	-				+1.7
1,371,920	-				+0.6
1,371,920	-				-0.6
1,371,920	-				-2.0
1,371,920	-				+0.4
1,371,920	-				-0.2
1,371,920	-				+0.2
1,371,920	-				-0.4
1,371,920	-				+0.6
1,371,920	-				-0.2
1,371,920	-				-0.4
1,371,920	-				-2.1
1,371,920	-				-1.1
1,371,920	-				+0.8
1,371,920	-				-1.2
1,371,920	-				+0.8
1,371,920	-				-0.2
1,371,920	-				-0.0
1,371,962	+				-0.3
1,371,962	+				+0.6
1,371,962	+				-0.4
1,371,963	-				-1.2
1,371,964	+				+0.8
1,371,964	+				-0.4
1,371,964	+				-0.0
1,371,964	+				+0.8
1,371,964	+				-1.4
1,371,965	-				-3.0
1,371,965	-				+1.2
1,372,092	+		DDA3937_RS06100	0.22	+1.1
1,372,093	-		DDA3937_RS06100	0.23	-0.1
1,372,273	-		DDA3937_RS06100	0.49	-0.2
1,372,273	-		DDA3937_RS06100	0.49	-1.0
1,372,332	-		DDA3937_RS06100	0.58	-1.7