Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05820

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,302,930	+				-0.0
1,302,988	+				-0.4
1,303,186	-		DDA3937_RS21990	0.18	-2.0
1,303,300	+		DDA3937_RS21990	0.46	-2.6
1,303,300	+		DDA3937_RS21990	0.46	-2.2
1,303,303	+		DDA3937_RS21990	0.47	-0.1
1,303,327	+		DDA3937_RS21990	0.53	-0.7
1,303,328	-		DDA3937_RS21990	0.53	-1.1
1,303,331	-		DDA3937_RS21990	0.54	+0.6
1,303,331	-		DDA3937_RS21990	0.54	-0.8
1,303,421	-		DDA3937_RS21990	0.77	-1.0
1,303,472	-		DDA3937_RS21990	0.89	-0.7
1,303,550	+				-1.4
1,303,637	+				-0.2
1,303,651	+				-0.8
1,303,669	+				-1.1
1,303,669	+				-0.7
1,303,684	-				-0.4
1,303,687	-				-1.4
1,303,700	+				-0.3
1,303,718	-				+0.8
1,303,720	+				+0.4
1,303,720	+				-0.1
1,303,737	-				+0.6
1,303,748	+				-0.1
1,303,777	+				+0.2
1,303,777	+				-0.4
1,303,778	-				-2.0
1,303,900	-				-0.7
1,303,961	+		DDA3937_RS05820	0.13	-1.2
1,303,985	+		DDA3937_RS05820	0.19	+0.3
1,303,985	+		DDA3937_RS05820	0.19	-0.4
1,303,986	-		DDA3937_RS05820	0.20	+0.3
1,303,986	-		DDA3937_RS05820	0.20	-1.2
1,304,020	-		DDA3937_RS05820	0.29	+0.4
1,304,020	-				-1.0
1,304,166	+		DDA3937_RS05820	0.68	-1.1
1,304,166	+		DDA3937_RS05820	0.68	-0.7
1,304,166	+		DDA3937_RS05820	0.68	-1.5
1,304,166	+		DDA3937_RS05820	0.68	-0.2
1,304,166	+		DDA3937_RS05820	0.68	-2.2
1,304,166	+				+0.3
1,304,166	+		DDA3937_RS05820	0.68	-1.4
1,304,166	+		DDA3937_RS05820	0.68	-3.6
1,304,166	+		DDA3937_RS05820	0.68	-2.7
1,304,166	+		DDA3937_RS05820	0.68	+1.1
1,304,166	+		DDA3937_RS05820	0.68	-0.2
1,304,166	+		DDA3937_RS05820	0.68	-0.7
1,304,167	-		DDA3937_RS05820	0.68	+0.6
1,304,167	-		DDA3937_RS05820	0.68	-2.3
1,304,167	-		DDA3937_RS05820	0.68	-1.1
1,304,167	-		DDA3937_RS05820	0.68	+0.2
1,304,167	-		DDA3937_RS05820	0.68	-1.0
1,304,167	-		DDA3937_RS05820	0.68	-0.8
1,304,248	-				+0.8
1,304,248	-				-1.3
1,304,312	+				-1.4
1,304,313	-				-2.1
1,304,313	-				+0.2
1,304,313	-				-2.0
1,304,317	-				+0.7
1,304,317	-				+0.0
1,304,343	-				-1.4
1,304,356	+				-1.4
1,304,385	-				+0.1
1,304,484	-				+0.3
1,304,484	-				-0.8
1,304,484	-				-0.6
1,304,521	-				-0.3
1,304,521	-				-0.4
1,304,540	+				-1.1
1,304,643	+				-1.0
1,304,657	-				-0.6
1,304,679	+				+0.8
1,304,685	-				-0.8
1,304,685	-				-1.7
1,304,705	+				-0.1
1,304,742	+				-0.2
1,304,748	-				+0.6
1,304,748	-				+0.1
1,304,810	+				-0.4
1,304,811	-				+0.9
1,304,811	-				+1.3
1,304,813	+				+0.4
1,304,814	-				-1.4
1,304,816	+				+0.0
1,304,816	+				+0.2
1,304,817	-				-0.4
1,304,817	-				-0.7
1,304,847	+				-0.4
1,304,899	+				+0.0
1,304,900	-				-1.0
1,304,933	-		DDA3937_RS05825	0.10	-3.2
1,305,005	+		DDA3937_RS05825	0.15	+0.2
1,305,007	+		DDA3937_RS05825	0.15	+1.3
1,305,007	+		DDA3937_RS05825	0.15	+0.0
1,305,008	-		DDA3937_RS05825	0.15	-0.5
1,305,008	-		DDA3937_RS05825	0.15	-1.0
1,305,037	-		DDA3937_RS05825	0.17	-0.4
1,305,046	+		DDA3937_RS05825	0.17	-1.1
1,305,160	+		DDA3937_RS05825	0.24	-1.3
1,305,170	+		DDA3937_RS05825	0.25	-1.0
1,305,171	-		DDA3937_RS05825	0.25	+0.3
1,305,184	-		DDA3937_RS05825	0.26	-1.2
1,305,186	-		DDA3937_RS05825	0.26	+0.8
1,305,186	-		DDA3937_RS05825	0.26	-0.4
1,305,192	+		DDA3937_RS05825	0.26	-0.8
1,305,230	+		DDA3937_RS05825	0.29	-0.4
1,305,240	+		DDA3937_RS05825	0.29	-0.8
1,305,242	+		DDA3937_RS05825	0.30	-0.9
1,305,242	+		DDA3937_RS05825	0.30	+0.4
1,305,243	-		DDA3937_RS05825	0.30	-1.4
1,305,243	-		DDA3937_RS05825	0.30	-0.7
1,305,243	-		DDA3937_RS05825	0.30	-0.9
1,305,243	-		DDA3937_RS05825	0.30	+0.1
1,305,243	-		DDA3937_RS05825	0.30	+0.9
1,305,253	-		DDA3937_RS05825	0.30	-0.6
1,305,276	-		DDA3937_RS05825	0.32	-1.0