Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05470

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,222,001	+				-0.1
1,222,056	+		DDA3937_RS05465	0.42	-0.4
1,222,056	+		DDA3937_RS05465	0.42	-0.9
1,222,057	-		DDA3937_RS05465	0.43	+0.2
1,222,057	-		DDA3937_RS05465	0.43	+0.3
1,222,057	-		DDA3937_RS05465	0.43	-1.3
1,222,057	-		DDA3937_RS05465	0.43	+0.3
1,222,108	-		DDA3937_RS05465	0.47	+0.3
1,222,287	+		DDA3937_RS05465	0.64	-0.1
1,222,288	-		DDA3937_RS05465	0.64	-0.9
1,222,288	-		DDA3937_RS05465	0.64	-0.2
1,222,364	+		DDA3937_RS05465	0.71	-0.5
1,222,365	-		DDA3937_RS05465	0.71	-0.2
1,222,365	-		DDA3937_RS05465	0.71	-0.4
1,222,368	-				-2.2
1,222,445	+		DDA3937_RS05465	0.79	-0.8
1,222,451	+		DDA3937_RS05465	0.79	+1.0
1,222,452	-		DDA3937_RS05465	0.79	+0.7
1,222,452	-		DDA3937_RS05465	0.79	+1.7
1,222,452	-		DDA3937_RS05465	0.79	-0.0
1,222,452	-		DDA3937_RS05465	0.79	-0.2
1,222,452	-		DDA3937_RS05465	0.79	-0.8
1,222,452	-		DDA3937_RS05465	0.79	-1.3
1,222,527	-		DDA3937_RS05465	0.87	-0.2
1,222,527	-		DDA3937_RS05465	0.87	-0.2
1,222,527	-		DDA3937_RS05465	0.87	+0.7
1,222,559	+		DDA3937_RS05465	0.90	-1.9
1,222,560	-		DDA3937_RS05465	0.90	+0.3
1,222,573	-				-0.6
1,222,690	+				-1.0
1,222,690	+				+0.1
1,222,690	+				+0.5
1,222,690	+				+0.7
1,222,690	+				+0.7
1,222,690	+				+0.2
1,222,690	+				+0.7
1,222,691	-				+0.1
1,222,698	+				-1.2
1,222,723	+				-0.9
1,222,723	+				+0.3
1,222,723	+				-1.9
1,222,723	+				+2.2
1,222,723	+				-0.5
1,222,724	-				-0.5
1,222,724	-				+0.3
1,222,730	-				+0.1
1,222,763	+				+2.2
1,222,772	+				+0.7
1,223,200	+		DDA3937_RS05470	0.37	+1.2
1,223,225	+		DDA3937_RS05470	0.40	-1.3
1,223,292	+		DDA3937_RS05470	0.45	-0.2
1,223,292	+		DDA3937_RS05470	0.45	-2.2
1,223,346	+		DDA3937_RS05470	0.50	-0.1
1,223,347	-		DDA3937_RS05470	0.50	-1.2
1,223,638	+				-0.3
1,223,647	+		DDA3937_RS05470	0.76	-1.9
1,223,679	-				-0.3
1,223,693	+		DDA3937_RS05470	0.80	-0.3
1,223,695	+				-0.7
1,223,696	-		DDA3937_RS05470	0.80	-1.2
1,223,696	-		DDA3937_RS05470	0.80	+0.2
1,223,755	+		DDA3937_RS05470	0.85	-2.2
1,223,821	+				-0.3
1,223,889	+				-0.6
1,223,924	+				-1.0
1,223,924	+				-0.0
1,223,952	+				-0.3
1,223,952	+				-1.3
1,223,993	+				-0.3
1,223,993	+				-0.5
1,223,993	+				+2.2
1,223,993	+				-1.2
1,224,326	+				+0.1