Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04960

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,111,937	+				+0.2
1,111,938	-				+0.5
1,111,942	+				+1.7
1,111,942	+				+0.4
1,111,942	+				-0.1
1,111,999	+				-0.1
1,112,028	+				-0.2
1,113,393	+		DDA3937_RS04960	0.57	-1.5
1,113,393	+		DDA3937_RS04960	0.57	-1.9
1,113,427	-		DDA3937_RS04960	0.62	-1.2
1,113,477	+		DDA3937_RS04960	0.68	-1.3
1,113,477	+		DDA3937_RS04960	0.68	-1.5
1,113,477	+		DDA3937_RS04960	0.68	-1.6
1,113,478	-		DDA3937_RS04960	0.68	+0.4
1,113,478	-		DDA3937_RS04960	0.68	-1.6
1,113,561	+		DDA3937_RS04960	0.78	-2.5
1,113,729	+				+0.3
1,113,750	-				-0.6
1,113,920	-				-0.8
1,113,926	-				+0.3
1,113,938	+				-0.5
1,113,939	-				+0.0
1,113,939	-				-0.0
1,113,939	-				-0.3
1,113,951	-				-0.6
1,113,960	+				-2.5
1,113,960	+				-0.3
1,113,989	+				-1.3
1,113,990	-				-0.9
1,114,068	+		DDA3937_RS04965	0.19	-0.9
1,114,069	-		DDA3937_RS04965	0.20	+1.3
1,114,069	-		DDA3937_RS04965	0.20	+1.4
1,114,069	-		DDA3937_RS04965	0.20	-0.0
1,114,069	-		DDA3937_RS04965	0.20	+0.1
1,114,140	+		DDA3937_RS04965	0.34	+0.5
1,114,141	-		DDA3937_RS04965	0.34	-0.5
1,114,142	+		DDA3937_RS04965	0.34	-1.8
1,114,142	+		DDA3937_RS04965	0.34	-0.7
1,114,143	-		DDA3937_RS04965	0.35	-0.5
1,114,325	-		DDA3937_RS04965	0.72	-1.6
1,114,325	-		DDA3937_RS04965	0.72	+1.5
1,114,335	+		DDA3937_RS04965	0.74	-2.6
1,114,335	+		DDA3937_RS04965	0.74	+0.1
1,114,593	-		DDA3937_RS04970	0.23	-0.5
1,114,646	-		DDA3937_RS04970	0.32	+0.4