Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23235

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,876,166	+		DDA3937_RS12635	0.57	+1.4
2,876,166	+		DDA3937_RS12635	0.57	-2.0
2,876,166	+		DDA3937_RS12635	0.57	+1.6
2,876,236	-		DDA3937_RS12635	0.62	+0.0
2,876,345	+				+1.0
2,876,346	-		DDA3937_RS12635	0.70	-0.6
2,876,407	+		DDA3937_RS12635	0.75	+0.0
2,876,408	-		DDA3937_RS12635	0.75	+1.0
2,876,408	-		DDA3937_RS12635	0.75	+0.6
2,876,467	+		DDA3937_RS12635	0.79	+0.6
2,876,467	+		DDA3937_RS12635	0.79	+0.2
2,876,518	+		DDA3937_RS12635	0.83	+0.4
2,876,518	+				+0.0
2,876,519	-		DDA3937_RS12635	0.83	+0.6
2,876,589	+		DDA3937_RS12635	0.88	+1.1
2,876,590	-		DDA3937_RS12635	0.88	-0.4
2,876,705	+				+0.6
2,876,795	+				+0.7
2,876,795	+				+0.3
2,876,796	-				-0.6
2,876,796	-				-1.0
2,876,921	-		DDA3937_RS12640	0.10	-2.8
2,877,000	+				+0.0
2,877,001	-				-1.8
2,877,006	+				-0.2
2,877,006	+				+0.7
2,877,006	+				+0.4
2,877,006	+				-0.8
2,877,006	+				-1.4
2,877,007	-				-0.3
2,877,018	+				-1.0
2,877,018	+				-2.0
2,877,019	-				-1.2
2,877,019	-				+0.6
2,877,020	+				-0.2
2,877,021	-				+0.2
2,877,048	+				+0.3
2,877,057	-				+0.1
2,877,066	+				+0.1
2,877,137	+		DDA3937_RS23235	0.20	-1.6
2,877,138	-		DDA3937_RS23235	0.20	+0.6
2,877,154	-		DDA3937_RS23235	0.27	+0.5
2,877,173	+		DDA3937_RS23235	0.36	+0.4
2,877,177	-		DDA3937_RS23235	0.38	+0.5
2,877,177	-		DDA3937_RS23235	0.38	+0.6
2,877,177	-		DDA3937_RS23235	0.38	-1.6
2,877,177	-		DDA3937_RS23235	0.38	-2.0
2,877,181	-		DDA3937_RS23235	0.40	-0.7
2,877,181	-		DDA3937_RS23235	0.40	-0.9
2,877,208	-		DDA3937_RS23235	0.52	-1.0
2,877,297	-				-0.2
2,877,297	-				-2.0
2,877,393	-				+1.0
2,877,855	+		DDA3937_RS12645	0.51	-0.4
2,877,855	+		DDA3937_RS12645	0.51	-0.4
2,877,873	-				+1.0
2,877,873	-				+0.7
2,877,949	+		DDA3937_RS12645	0.75	+0.8
2,877,981	+		DDA3937_RS12645	0.83	-0.7
2,878,042	+				-1.6
2,878,056	+				-1.3
2,878,079	-				+1.1
2,878,231	-				+0.6
2,878,274	-		DDA3937_RS12650	0.12	-0.7
2,878,307	+		DDA3937_RS12650	0.16	+1.3
2,878,307	+		DDA3937_RS12650	0.16	-1.6
2,878,308	-		DDA3937_RS12650	0.16	-0.7
2,878,308	-		DDA3937_RS12650	0.16	+0.0
2,878,308	-		DDA3937_RS12650	0.16	-0.5
2,878,308	-		DDA3937_RS12650	0.16	-0.9
2,878,308	-		DDA3937_RS12650	0.16	+0.1
2,878,308	-		DDA3937_RS12650	0.16	+0.0