Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS22450

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,013,289	-				-0.3
4,013,343	+				+0.1
4,013,343	+				-0.1
4,013,344	-				+0.1
4,013,344	-				-1.5
4,013,385	+				+0.2
4,013,385	+				-2.9
4,013,385	+				-1.3
4,013,386	-				-0.1
4,013,386	-				-0.5
4,013,386	-				-0.2
4,013,388	+				-1.4
4,013,388	+				+0.0
4,013,465	+		DDA3937_RS17615	0.20	-0.0
4,013,465	+		DDA3937_RS17615	0.20	+0.7
4,013,465	+		DDA3937_RS17615	0.20	-0.6
4,013,466	-		DDA3937_RS17615	0.20	+0.9
4,013,466	-		DDA3937_RS17615	0.20	+0.1
4,013,466	-		DDA3937_RS17615	0.20	-0.1
4,013,466	-		DDA3937_RS17615	0.20	+0.2
4,013,466	-		DDA3937_RS17615	0.20	+0.8
4,013,466	-		DDA3937_RS17615	0.20	-0.4
4,013,514	+		DDA3937_RS17615	0.29	-0.8
4,013,515	-		DDA3937_RS17615	0.29	+0.1
4,013,515	-		DDA3937_RS17615	0.29	+0.7
4,013,759	-		DDA3937_RS17615	0.71	+0.0
4,013,914	+				+0.7
4,013,915	-				+1.4
4,013,915	-				+0.5
4,013,921	-				+0.4
4,013,927	-				+0.1
4,013,927	-				+0.2
4,013,962	+				-0.8
4,013,963	-				-0.3
4,014,140	+		DDA3937_RS22450	0.61	-0.1
4,014,143	+		DDA3937_RS22450	0.63	+1.0
4,014,144	-		DDA3937_RS22450	0.63	+0.6
4,014,144	-		DDA3937_RS22450	0.63	+1.0
4,014,201	-				+0.4
4,014,219	+				+0.0
4,014,219	+				+0.6
4,014,220	-				+0.4
4,014,229	-				-2.6
4,014,240	+				-0.3
4,014,240	+				+0.2
4,014,240	+				+0.0
4,014,241	-				-0.3
4,014,242	+				+0.6
4,014,242	+				-1.3
4,014,242	+				+0.4
4,014,242	+				-0.6
4,014,242	+				-2.2
4,014,242	+				+1.2
4,014,242	+				+0.4
4,014,242	+				-0.1
4,014,242	+				+0.7
4,014,243	-				+0.0
4,014,243	-				-1.2
4,014,243	-				-0.2
4,014,243	-				+0.0
4,014,295	-				-1.2
4,014,316	+				+1.0
4,014,325	+				+0.2
4,014,326	-				+0.2
4,014,326	-				-1.3
4,014,338	+				-1.0
4,014,375	-				+0.4
4,014,381	+				+0.4
4,014,391	+				-1.0
4,014,391	+				-0.8
4,014,392	-				-0.8
4,014,392	-				-0.6
4,014,393	+				-0.3
4,014,393	+				+0.5
4,014,393	+				-0.1
4,014,394	-				+1.0
4,014,394	-				-0.3
4,014,422	+				-0.1
4,014,422	+				-1.9
4,014,449	+		DDA3937_RS21705	0.11	+0.3
4,014,449	+		DDA3937_RS21705	0.11	+0.8
4,014,449	+		DDA3937_RS21705	0.11	+0.2
4,014,450	-		DDA3937_RS21705	0.11	-0.4
4,014,450	-		DDA3937_RS21705	0.11	-0.0
4,014,450	-		DDA3937_RS21705	0.11	-1.6
4,014,450	-		DDA3937_RS21705	0.11	+0.1
4,014,450	-		DDA3937_RS21705	0.11	-1.5
4,014,454	+		DDA3937_RS21705	0.12	-0.3
4,014,474	+		DDA3937_RS21705	0.16	+1.4
4,014,474	+		DDA3937_RS21705	0.16	+0.8
4,014,475	-		DDA3937_RS21705	0.17	-0.3
4,014,475	-		DDA3937_RS21705	0.17	-0.6
4,014,498	+		DDA3937_RS21705	0.21	+0.0
4,014,594	-		DDA3937_RS21705	0.41	-1.0
4,014,734	+		DDA3937_RS21705	0.70	-0.5
4,014,883	+				-0.0
4,014,991	-				+0.6
4,015,131	-				-0.6