Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21260

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,840,419	-		DDA3937_RS21255	0.41	-0.3
4,840,498	+		DDA3937_RS21255	0.50	-0.7
4,840,498	+		DDA3937_RS21255	0.50	-0.3
4,840,498	+		DDA3937_RS21255	0.50	+0.7
4,840,499	-		DDA3937_RS21255	0.50	+0.2
4,840,499	-		DDA3937_RS21255	0.50	+0.2
4,840,499	-		DDA3937_RS21255	0.50	+0.7
4,840,499	-		DDA3937_RS21255	0.50	-0.3
4,840,631	+		DDA3937_RS21255	0.66	-0.0
4,840,632	-		DDA3937_RS21255	0.66	-0.6
4,840,653	+		DDA3937_RS21255	0.69	-0.4
4,840,653	+		DDA3937_RS21255	0.69	-0.3
4,840,654	-		DDA3937_RS21255	0.69	-0.6
4,840,654	-		DDA3937_RS21255	0.69	-0.6
4,840,654	-		DDA3937_RS21255	0.69	+0.3
4,840,655	+		DDA3937_RS21255	0.69	+0.2
4,840,655	+		DDA3937_RS21255	0.69	+0.5
4,840,655	+		DDA3937_RS21255	0.69	-0.1
4,840,656	-		DDA3937_RS21255	0.69	+0.1
4,840,676	+		DDA3937_RS21255	0.71	-0.4
4,840,676	+		DDA3937_RS21255	0.71	+0.0
4,840,676	+		DDA3937_RS21255	0.71	+0.5
4,840,676	+		DDA3937_RS21255	0.71	+0.2
4,840,676	+		DDA3937_RS21255	0.71	-0.3
4,840,677	-		DDA3937_RS21255	0.71	+0.0
4,840,677	-		DDA3937_RS21255	0.71	-0.2
4,840,677	-		DDA3937_RS21255	0.71	-0.7
4,840,677	-		DDA3937_RS21255	0.71	+0.3
4,840,677	-		DDA3937_RS21255	0.71	-0.2
4,840,677	-		DDA3937_RS21255	0.71	-1.4
4,840,806	-		DDA3937_RS21255	0.87	-1.0
4,840,907	+				+0.1
4,840,908	-				-0.1
4,840,917	+				-0.5
4,840,917	+				+0.5
4,840,917	+				-0.3
4,840,917	+				+0.2
4,840,918	-				+0.6
4,840,918	-				-1.7
4,840,918	-				-0.7
4,840,918	-				-0.3
4,840,918	-				-2.0
4,840,967	-				+0.1
4,840,969	+				-0.3
4,840,969	+				-1.0
4,840,969	+				+0.6
4,840,969	+				-0.8
4,840,969	+				-0.6
4,840,969	+				+0.1
4,840,969	+				-0.0
4,840,969	+				+0.3
4,840,969	+				+0.5
4,840,969	+				-1.0
4,840,969	+				+0.2
4,840,969	+				-0.3
4,840,970	-				-0.5
4,840,970	-				+0.1
4,840,970	-				-0.7
4,840,970	-				-1.1
4,840,970	-				+0.2
4,840,970	-				+1.7
4,840,970	-				-0.9
4,840,971	+				+0.1
4,840,971	+				-0.9
4,840,971	+				-3.2
4,840,972	-				-0.9
4,840,972	-				+0.4
4,840,976	+				-0.3
4,840,976	+				-1.6
4,840,980	+				-1.6
4,840,981	-				+0.4
4,840,981	-				-0.3
4,841,127	+				-1.6
4,841,128	-				+0.3
4,841,128	-				+0.0
4,841,151	+		DDA3937_RS21260	0.16	-0.8
4,841,182	+		DDA3937_RS21260	0.27	-1.5
4,841,206	+		DDA3937_RS21260	0.36	-1.3
4,841,207	-		DDA3937_RS21260	0.36	-0.5
4,841,207	-		DDA3937_RS21260	0.36	+0.1
4,841,207	-		DDA3937_RS21260	0.36	-0.7
4,841,207	-		DDA3937_RS21260	0.36	-0.3
4,841,372	-				-0.5
4,841,374	-				-0.1
4,841,402	+				+0.1
4,841,403	-				+0.4
4,841,403	-				-1.0
4,841,414	+				+0.1
4,841,447	+				-0.6
4,841,448	-				-0.2
4,841,448	-				+1.9
4,841,448	-				-0.3
4,841,486	+				-0.6
4,841,486	+				-0.2
4,841,486	+				+0.0
4,841,486	+				-0.7
4,841,486	+				+1.0
4,841,486	+				+0.8
4,841,486	+				-1.2
4,841,487	-				-0.5
4,841,487	-				-0.5
4,841,487	-				-0.3
4,841,487	-				-0.2
4,841,487	-				+0.7
4,841,487	-				-0.6
4,841,487	-				+0.3
4,841,487	-				-0.2
4,841,487	-				-0.3
4,841,487	-				+0.0
4,841,487	-				-0.4
4,841,500	+				+0.9
4,841,500	+				-0.1
4,841,501	-				+0.7
4,841,501	-				+0.6
4,841,501	-				-0.7
4,841,532	+				-1.3
4,841,533	-				+0.3
4,841,533	-				-0.1
4,841,837	+		DDA3937_RS21265	0.16	+1.4
4,841,873	+		DDA3937_RS21265	0.17	+0.5
4,841,874	-		DDA3937_RS21265	0.17	+0.2
4,842,164	-		DDA3937_RS21265	0.32	+0.7
4,842,173	+		DDA3937_RS21265	0.32	+1.0
4,842,173	+		DDA3937_RS21265	0.32	+0.0
4,842,191	+		DDA3937_RS21265	0.33	+1.3
4,842,191	+		DDA3937_RS21265	0.33	-0.3
4,842,191	+		DDA3937_RS21265	0.33	+0.2
4,842,191	+		DDA3937_RS21265	0.33	+0.1
4,842,192	-		DDA3937_RS21265	0.33	+0.3
4,842,192	-		DDA3937_RS21265	0.33	-0.3
4,842,192	-		DDA3937_RS21265	0.33	+1.1
4,842,192	-		DDA3937_RS21265	0.33	+0.8
4,842,192	-		DDA3937_RS21265	0.33	+1.1
4,842,224	+		DDA3937_RS21265	0.35	-2.1
4,842,224	+		DDA3937_RS21265	0.35	-0.2
4,842,225	-		DDA3937_RS21265	0.35	+0.2
4,842,233	+		DDA3937_RS21265	0.35	-1.5
4,842,234	-		DDA3937_RS21265	0.35	+0.4
4,842,234	-		DDA3937_RS21265	0.35	-1.7