Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,795,320	+		DDA3937_RS21065	0.21	-0.6
4,795,320	+		DDA3937_RS21065	0.21	+0.2
4,795,321	-		DDA3937_RS21065	0.21	-0.1
4,795,321	-		DDA3937_RS21065	0.21	-0.1
4,795,341	-		DDA3937_RS21065	0.23	-0.2
4,795,371	+		DDA3937_RS21065	0.27	-0.4
4,795,371	+		DDA3937_RS21065	0.27	-0.1
4,795,372	-		DDA3937_RS21065	0.27	-0.0
4,795,372	-		DDA3937_RS21065	0.27	-1.3
4,795,438	+		DDA3937_RS21065	0.35	-2.5
4,795,507	+		DDA3937_RS21065	0.44	+0.6
4,795,570	+		DDA3937_RS21065	0.52	-0.2
4,795,570	+		DDA3937_RS21065	0.52	+0.2
4,795,571	-		DDA3937_RS21065	0.52	-0.3
4,795,605	+		DDA3937_RS21065	0.56	+0.2
4,795,605	+		DDA3937_RS21065	0.56	+0.3
4,795,605	+		DDA3937_RS21065	0.56	-1.9
4,795,605	+		DDA3937_RS21065	0.56	-0.6
4,795,605	+		DDA3937_RS21065	0.56	-1.7
4,795,606	-		DDA3937_RS21065	0.56	+1.9
4,795,606	-		DDA3937_RS21065	0.56	+0.2
4,795,613	-		DDA3937_RS21065	0.57	-1.0
4,795,613	-		DDA3937_RS21065	0.57	+0.4
4,795,771	+				-1.3
4,795,772	-		DDA3937_RS21065	0.77	+0.2
4,795,906	+				-1.3
4,795,936	-				+0.8
4,795,978	+				+0.8
4,795,978	+				+0.0
4,795,978	+				-0.4
4,795,978	+				-0.8
4,795,978	+				-0.7
4,795,978	+				-0.1
4,795,980	+				+0.1
4,795,980	+				+0.2
4,795,980	+				+0.2
4,795,980	+				-0.8
4,795,981	-				-1.0
4,796,054	+				-1.3
4,796,054	+				+0.5
4,796,055	-				-0.2
4,796,055	-				+0.0
4,796,055	-				-0.3
4,796,140	-				+0.9
4,796,158	-				-0.3
4,796,163	+				-0.1
4,796,163	+				-0.5
4,796,169	+				-1.3
4,796,170	-				+0.5
4,796,170	-				+0.0
4,796,185	+				-0.3
4,796,186	-				-0.1
4,796,189	+				-0.9
4,796,190	-				+0.1
4,796,190	-				-1.1
4,796,190	-				+1.0
4,796,190	-				-0.2
4,796,190	-				-0.3
4,796,190	-				+0.1
4,796,202	+				+0.9
4,796,202	+				+0.1
4,796,202	+				+0.9
4,796,202	+				+0.5
4,796,203	-				-0.4
4,796,203	-				+0.4
4,796,203	-				-0.3
4,796,206	+				-0.2
4,796,223	+				-0.1
4,796,223	+				-0.2
4,796,223	+				-1.0
4,796,236	+				-0.5
4,796,236	+				+1.7
4,796,236	+				-0.2
4,796,236	+				-1.0
4,796,236	+				-2.5
4,796,237	-				-0.3
4,796,237	-				-0.2
4,796,240	+				-2.3
4,796,241	-				-0.0
4,796,255	-				+0.0
4,796,297	+				-0.6
4,796,298	-				-0.9
4,796,304	+				+0.3
4,796,305	-				-0.8
4,796,537	+		DDA3937_RS21070	0.48	-0.3
4,796,550	-		DDA3937_RS21070	0.50	+0.5
4,796,550	-		DDA3937_RS21070	0.50	-0.8
4,796,550	-		DDA3937_RS21070	0.50	-0.7
4,796,552	+		DDA3937_RS21070	0.51	-1.5
4,796,729	+		DDA3937_RS21070	0.82	-0.8
4,796,763	-		DDA3937_RS21070	0.88	-2.7
4,796,792	+				-0.5
4,796,792	+				-0.3
4,796,793	-				-0.2
4,796,793	-				+0.5
4,796,793	-				-0.6
4,796,793	-				+1.2
4,796,793	-				-0.3
4,796,906	-		DDA3937_RS21075	0.18	+0.7
4,796,906	-		DDA3937_RS21075	0.18	-0.6
4,796,954	+		DDA3937_RS21075	0.28	-0.4
4,796,955	-		DDA3937_RS21075	0.29	+0.5
4,796,955	-		DDA3937_RS21075	0.29	-0.1
4,796,982	-		DDA3937_RS21075	0.34	-0.4
4,796,982	-		DDA3937_RS21075	0.34	-0.5
4,797,137	+		DDA3937_RS21075	0.68	-0.6
4,797,137	+		DDA3937_RS21075	0.68	+0.3
4,797,168	-		DDA3937_RS21075	0.75	-0.0
4,797,184	+		DDA3937_RS21075	0.79	+0.1
4,797,184	+		DDA3937_RS21075	0.79	-0.7
4,797,185	-		DDA3937_RS21075	0.79	+0.4
4,797,187	+		DDA3937_RS21075	0.79	+0.8
4,797,203	+		DDA3937_RS21075	0.83	+0.6
4,797,203	+		DDA3937_RS21075	0.83	-0.3
4,797,204	-		DDA3937_RS21075	0.83	-0.6
4,797,224	-		DDA3937_RS21075	0.88	+0.7
4,797,313	+				-0.0
4,797,313	+				-2.3
4,797,314	-				-0.8
4,797,314	-				-0.1
4,797,348	-				+0.1
4,797,352	+				-0.6
4,797,391	-				+0.8
4,797,391	-				-1.3
4,797,406	+				+0.3
4,797,407	-				-1.1
4,797,407	-				+0.4
4,797,428	+				-1.0
4,797,568	+				-0.6
4,797,568	+				-0.9
4,797,570	+				-0.1
4,797,571	-				+0.3
4,797,634	-				-0.6
4,797,634	-				-0.3
4,797,659	+				-0.0
4,797,659	+				-1.8
4,797,659	+				-0.3
4,797,660	-				-0.3
4,797,660	-				-0.5
4,797,671	+				+0.2
4,797,679	+				+0.4
4,797,738	+				-0.2
4,797,738	+				-0.9
4,797,748	+				-0.6
4,797,749	-				+0.3
4,797,751	+				-0.1
4,797,752	-				-0.2
4,797,752	-				-1.6
4,797,752	-				+0.9
4,797,752	-				-0.9
4,797,766	+				+0.1
4,797,767	-				+0.2
4,797,781	-				-0.4
4,797,781	-				+0.2
4,797,799	-				-0.0
4,797,799	-				-0.6