Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,127,975	-				-0.7
4,127,975	-				-2.7
4,127,975	-				+0.1
4,127,975	-				-1.7
4,128,085	+				-0.4
4,128,162	+				-0.5
4,128,204	+				-0.8
4,128,205	-				-0.4
4,128,228	+				+0.3
4,128,229	-				-0.2
4,128,231	+				+0.2
4,128,231	+				-1.2
4,128,274	+				-1.5
4,128,414	-				+0.0
4,128,428	+				-0.1
4,128,429	-				-2.1
4,128,433	-				-0.7
4,128,433	-				+0.5
4,128,433	-				-0.4
4,128,479	-				-0.6
4,128,524	+				+0.1
4,128,553	+				-0.2
4,128,553	+				-1.1
4,128,554	-				+2.3
4,128,554	-				-1.7
4,128,554	-				-0.3
4,128,669	+				-0.3
4,128,713	+				-0.3
4,128,722	+				+0.3
4,128,737	-				-1.7
4,128,737	-				+0.5
4,128,744	+				+0.1
4,128,744	+				+0.3
4,128,744	+				-0.5
4,128,744	+				-0.3
4,128,744	+				-0.2
4,128,745	-				-0.3
4,128,756	-				-1.8
4,128,756	-				+0.1
4,128,756	-				-0.3
4,128,774	+				+0.3
4,128,797	-				-0.8
4,128,797	-				-0.5
4,128,806	+				-0.3
4,128,807	-				+0.1
4,128,807	-				-0.8
4,128,807	-				-1.1
4,128,807	-				-0.7
4,128,829	+				-0.5
4,128,829	+				-0.5
4,128,829	+				+1.8
4,128,829	+				-0.2
4,128,830	-				+1.8
4,128,830	-				-0.5
4,128,830	-				+0.5
4,128,830	-				-0.5
4,128,830	-				-0.2
4,128,834	+				+0.4
4,128,834	+				+0.5
4,128,834	+				+0.2
4,128,834	+				+0.0
4,128,834	+				-0.1
4,128,834	+				+1.1
4,128,835	-				+0.3
4,128,835	-				-0.2
4,128,835	-				+0.9
4,128,895	+		DDA3937_RS18090	0.13	-2.3
4,128,895	+		DDA3937_RS18090	0.13	+0.9
4,128,895	+		DDA3937_RS18090	0.13	-1.4
4,128,895	+		DDA3937_RS18090	0.13	-0.5
4,128,896	-		DDA3937_RS18090	0.13	+0.0
4,128,896	-		DDA3937_RS18090	0.13	-0.9
4,129,010	-		DDA3937_RS18090	0.38	+0.9
4,129,099	+		DDA3937_RS18090	0.57	-2.0
4,129,099	+		DDA3937_RS18090	0.57	-1.3
4,129,100	-		DDA3937_RS18090	0.57	+0.5
4,129,100	-		DDA3937_RS18090	0.57	-0.1
4,129,100	-		DDA3937_RS18090	0.57	+1.0
4,129,123	+		DDA3937_RS18090	0.62	-0.1
4,129,200	+		DDA3937_RS18090	0.79	-1.1
4,129,200	+		DDA3937_RS18090	0.79	-0.8
4,129,200	+		DDA3937_RS18090	0.79	-0.5
4,129,200	+		DDA3937_RS18090	0.79	-0.2
4,129,237	+		DDA3937_RS18090	0.87	-1.8
4,129,294	+				-0.5
4,129,322	+				-0.4
4,129,322	+				+0.8
4,129,323	-				+0.3
4,129,323	-				+1.5
4,129,326	+				-0.9
4,129,338	-				-0.8
4,129,338	-				+0.6
4,129,338	-				-0.4
4,129,365	-				-0.4
4,129,365	-				-0.1
4,129,365	-				+1.0
4,129,365	-				+1.1
4,129,365	-				-0.5
4,129,368	-				-0.7
4,129,426	+				-0.5
4,129,427	-				+0.6
4,129,434	+				+0.9
4,129,434	+				-0.3
4,129,434	+				+0.2
4,129,434	+				+1.1
4,129,434	+				+0.6
4,129,434	+				-1.5
4,129,435	-				-0.7
4,129,435	-				-0.1
4,129,435	-				-2.1
4,129,438	+				-0.4
4,129,438	+				+1.8
4,129,438	+				-1.0
4,129,438	+				-0.8
4,129,439	-				-2.1
4,129,439	-				-1.5
4,129,439	-				-0.0
4,129,486	+				+0.5
4,129,497	+				-2.5
4,129,499	+				-0.1
4,129,499	+				-0.4
4,129,499	+				+0.8
4,129,500	-				-0.3
4,129,500	-				-0.1
4,129,500	-				+0.1
4,129,521	-				-0.8
4,129,533	+				+0.2
4,129,559	+				-0.6
4,129,559	+				+0.7
4,129,596	-				+0.6
4,129,612	+				+2.3
4,129,612	+				-0.6
4,129,613	-				+1.7
4,129,630	-				-0.3
4,129,696	+				-0.5
4,129,963	-				-1.1
4,129,998	+		DDA3937_RS18095	0.34	-0.0
4,129,999	-		DDA3937_RS18095	0.35	+0.7
4,130,011	-		DDA3937_RS18095	0.36	-0.8
4,130,014	+		DDA3937_RS18095	0.36	-1.0
4,130,106	+				+1.5