Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,847,673	+				+1.4
3,847,674	-				+1.4
3,847,675	+				-0.3
3,847,675	+				+0.1
3,847,676	-				+0.4
3,847,676	-				-0.9
3,847,676	-				+0.4
3,847,676	-				-0.1
3,847,676	-				-0.3
3,847,676	-				-0.4
3,847,683	+				+0.5
3,847,683	+				-0.2
3,847,683	+				+0.8
3,847,683	+				-0.0
3,847,683	+				+1.1
3,847,683	+				+0.2
3,847,684	-				-0.2
3,847,700	+				-1.6
3,847,700	+				-0.3
3,847,701	-				+0.3
3,847,701	-				+2.2
3,847,704	-				-1.3
3,847,704	-				-1.8
3,847,704	-				+0.3
3,847,709	-				-0.2
3,847,717	+				-0.6
3,847,718	-				-0.6
3,847,719	+				-1.5
3,847,730	+				+0.1
3,847,730	+				-0.6
3,847,730	+				+0.6
3,847,731	-				-1.1
3,847,731	-				+0.1
3,847,731	-				-0.2
3,847,765	+				+0.1
3,847,765	+				-0.9
3,847,766	-				+0.4
3,847,766	-				-0.8
3,847,766	-				+0.7
3,847,766	-				+0.4
3,847,768	+				+0.0
3,847,769	-				-0.0
3,847,769	-				+0.4
3,847,774	+				-0.5
3,847,775	-				-0.3
3,847,775	-				-0.4
3,847,775	-				-0.1
3,847,775	-				+0.4
3,847,790	+				+0.4
3,847,822	+				+0.1
3,847,848	-				+0.5
3,847,923	-				-0.2
3,848,021	+				-0.7
3,848,025	+				+0.3
3,848,025	+				-3.0
3,848,025	+				-1.4
3,848,025	+				+0.6
3,848,026	-				-0.0
3,848,026	-				+1.2
3,848,026	-				+0.1
3,848,026	-				-1.3
3,848,026	-				-1.1
3,848,049	-				+0.8
3,848,053	+				+2.5
3,848,053	+				-0.5
3,848,053	+				-1.1
3,848,053	+				+0.2
3,848,054	-				+0.4
3,848,054	-				+0.1
3,848,061	-				-0.4
3,848,079	-				+1.8
3,848,237	+		DDA3937_RS16935	0.12	-0.8
3,848,260	+		DDA3937_RS16935	0.15	+0.8
3,848,260	+		DDA3937_RS16935	0.15	-0.5
3,848,261	-		DDA3937_RS16935	0.15	-1.6
3,848,284	+		DDA3937_RS16935	0.18	-1.2
3,848,285	-		DDA3937_RS16935	0.18	-1.0
3,848,480	+		DDA3937_RS16935	0.45	+0.2
3,848,588	+		DDA3937_RS16935	0.59	-1.2
3,848,626	+		DDA3937_RS16935	0.65	-1.2
3,848,627	-		DDA3937_RS16935	0.65	-0.1
3,848,879	+				+0.4
3,848,936	+				-0.3
3,848,936	+				-0.0
3,848,936	+				-0.8
3,848,937	-				-0.1
3,848,937	-				+0.4
3,849,072	-		DDA3937_RS16940	0.10	+1.3
3,849,198	-		DDA3937_RS16940	0.17	+0.1
3,849,198	-		DDA3937_RS16940	0.17	-0.8
3,849,227	+		DDA3937_RS16940	0.19	+0.2
3,849,228	-		DDA3937_RS16940	0.19	+0.1
3,849,361	+		DDA3937_RS16940	0.27	-0.1
3,849,362	-		DDA3937_RS16940	0.27	+1.2
3,849,506	-		DDA3937_RS16940	0.35	-0.4
3,849,551	+		DDA3937_RS16940	0.38	+0.4
3,849,551	+		DDA3937_RS16940	0.38	-0.9
3,849,552	-		DDA3937_RS16940	0.38	+0.2
3,849,604	+		DDA3937_RS16940	0.41	+0.9
3,849,688	+		DDA3937_RS16940	0.46	-0.2
3,849,689	-		DDA3937_RS16940	0.46	+0.3
3,849,689	-		DDA3937_RS16940	0.46	-0.0
3,849,771	-		DDA3937_RS16940	0.51	+1.4
3,849,785	+		DDA3937_RS16940	0.52	-0.4
3,849,785	+		DDA3937_RS16940	0.52	+0.2
3,849,785	+		DDA3937_RS16940	0.52	+0.5
3,849,786	-		DDA3937_RS16940	0.52	+0.0
3,849,787	+		DDA3937_RS16940	0.52	+0.9
3,849,787	+		DDA3937_RS16940	0.52	-0.0
3,849,787	+		DDA3937_RS16940	0.52	+0.2
3,849,787	+		DDA3937_RS16940	0.52	-0.8
3,849,788	-		DDA3937_RS16940	0.52	-0.1
3,849,788	-		DDA3937_RS16940	0.52	+0.7
3,849,861	+		DDA3937_RS16940	0.56	+0.1
3,849,861	+		DDA3937_RS16940	0.56	-0.5
3,849,861	+		DDA3937_RS16940	0.56	-0.3
3,849,861	+		DDA3937_RS16940	0.56	-0.0
3,849,861	+		DDA3937_RS16940	0.56	-1.5
3,849,861	+		DDA3937_RS16940	0.56	-1.0
3,849,861	+		DDA3937_RS16940	0.56	+0.7
3,849,862	-		DDA3937_RS16940	0.56	+0.5
3,849,862	-		DDA3937_RS16940	0.56	+0.9
3,849,862	-		DDA3937_RS16940	0.56	+0.5
3,849,862	-		DDA3937_RS16940	0.56	+0.4
3,849,862	-		DDA3937_RS16940	0.56	-0.8
3,849,862	-		DDA3937_RS16940	0.56	-0.6
3,849,862	-		DDA3937_RS16940	0.56	+0.2
3,849,866	+		DDA3937_RS16940	0.56	+1.0
3,849,866	+		DDA3937_RS16940	0.56	-0.0
3,849,867	-		DDA3937_RS16940	0.56	+0.4