Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16890

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,838,985	-				-0.6
3,838,985	-				+1.0
3,839,040	-				+0.1
3,839,085	-				+0.8
3,839,085	-				-0.2
3,839,180	+				-0.4
3,839,180	+				+0.4
3,839,180	+				-1.2
3,839,181	-				+0.7
3,839,327	+		DDA3937_RS16885	0.14	+0.3
3,839,327	+		DDA3937_RS16885	0.14	-0.8
3,839,328	-		DDA3937_RS16885	0.15	+0.0
3,839,328	-		DDA3937_RS16885	0.15	+1.2
3,839,328	-		DDA3937_RS16885	0.15	+0.4
3,839,355	-		DDA3937_RS16885	0.19	+0.5
3,839,357	+		DDA3937_RS16885	0.19	-0.3
3,839,357	+		DDA3937_RS16885	0.19	+1.4
3,839,357	+		DDA3937_RS16885	0.19	+1.1
3,839,357	+		DDA3937_RS16885	0.19	-0.2
3,839,357	+		DDA3937_RS16885	0.19	+0.3
3,839,357	+		DDA3937_RS16885	0.19	+1.4
3,839,358	-		DDA3937_RS16885	0.19	+0.4
3,839,358	-		DDA3937_RS16885	0.19	+0.4
3,839,358	-		DDA3937_RS16885	0.19	+0.4
3,839,513	-		DDA3937_RS16885	0.44	+0.6
3,839,678	-		DDA3937_RS16885	0.70	-0.2
3,839,679	+		DDA3937_RS16885	0.70	+0.7
3,839,679	+		DDA3937_RS16885	0.70	+0.7
3,839,679	+		DDA3937_RS16885	0.70	+0.1
3,839,680	-		DDA3937_RS16885	0.71	+0.0
3,839,680	-		DDA3937_RS16885	0.71	+0.0
3,839,680	-		DDA3937_RS16885	0.71	-0.6
3,839,680	-		DDA3937_RS16885	0.71	+0.5
3,839,730	+		DDA3937_RS16885	0.79	-0.4
3,839,730	+		DDA3937_RS16885	0.79	+0.5
3,839,730	+		DDA3937_RS16885	0.79	-0.3
3,839,730	+		DDA3937_RS16885	0.79	+0.3
3,839,731	-		DDA3937_RS16885	0.79	+0.1
3,839,731	-		DDA3937_RS16885	0.79	-0.3
3,839,731	-		DDA3937_RS16885	0.79	-1.2
3,839,737	+		DDA3937_RS16885	0.80	-0.5
3,839,737	+		DDA3937_RS16885	0.80	-2.6
3,839,737	+		DDA3937_RS16885	0.80	+0.5
3,839,737	+		DDA3937_RS16885	0.80	+0.2
3,839,737	+		DDA3937_RS16885	0.80	+0.9
3,839,738	-		DDA3937_RS16885	0.80	-1.0
3,839,855	-				-0.1
3,839,855	-				+0.4
3,839,940	-				+0.7
3,839,983	+				+0.4
3,839,984	-				-0.2
3,839,986	+				-2.0
3,839,987	-				+0.4
3,840,076	-				-0.2
3,840,076	-				-0.2
3,840,076	-				+0.4
3,840,076	-				-0.2
3,840,113	+		DDA3937_RS16890	0.12	+0.2
3,840,114	-		DDA3937_RS16890	0.12	-1.2
3,840,126	+		DDA3937_RS16890	0.13	+0.7
3,840,126	+		DDA3937_RS16890	0.13	+0.8
3,840,126	+		DDA3937_RS16890	0.13	-0.4
3,840,127	-		DDA3937_RS16890	0.14	+1.0
3,840,127	-		DDA3937_RS16890	0.14	+0.1
3,840,127	-		DDA3937_RS16890	0.14	+0.5
3,840,127	-		DDA3937_RS16890	0.14	+0.7
3,840,127	-		DDA3937_RS16890	0.14	-0.4
3,840,127	-		DDA3937_RS16890	0.14	-0.1
3,840,276	+		DDA3937_RS16890	0.28	-0.1
3,840,276	+		DDA3937_RS16890	0.28	-0.0
3,840,276	+		DDA3937_RS16890	0.28	+0.2
3,840,276	+		DDA3937_RS16890	0.28	+1.6
3,840,394	+		DDA3937_RS16890	0.39	+1.1
3,840,394	+		DDA3937_RS16890	0.39	-0.1
3,840,395	-		DDA3937_RS16890	0.39	-1.6
3,840,395	-		DDA3937_RS16890	0.39	-0.3
3,840,395	-		DDA3937_RS16890	0.39	+0.2
3,840,395	-		DDA3937_RS16890	0.39	+1.0
3,840,395	-		DDA3937_RS16890	0.39	+0.0
3,840,420	+		DDA3937_RS16890	0.41	+0.7
3,840,420	+		DDA3937_RS16890	0.41	+0.7
3,840,420	+		DDA3937_RS16890	0.41	-0.1
3,840,420	+		DDA3937_RS16890	0.41	+1.1
3,840,421	-		DDA3937_RS16890	0.42	+0.4
3,840,429	+		DDA3937_RS16890	0.42	+0.3
3,840,429	+		DDA3937_RS16890	0.42	+0.0
3,840,429	+		DDA3937_RS16890	0.42	-0.7
3,840,429	+		DDA3937_RS16890	0.42	+0.2
3,840,454	+		DDA3937_RS16890	0.45	+0.2
3,840,455	-		DDA3937_RS16890	0.45	-3.5
3,840,455	-		DDA3937_RS16890	0.45	-0.5
3,840,455	-		DDA3937_RS16890	0.45	-1.6
3,840,455	-		DDA3937_RS16890	0.45	+0.1
3,840,559	+		DDA3937_RS16890	0.55	+0.8
3,840,559	+		DDA3937_RS16890	0.55	+0.0
3,840,559	+		DDA3937_RS16890	0.55	-0.7
3,840,559	+		DDA3937_RS16890	0.55	+0.2
3,840,560	-		DDA3937_RS16890	0.55	-0.6
3,840,560	-		DDA3937_RS16890	0.55	-0.5
3,840,641	+		DDA3937_RS16890	0.62	-1.2
3,840,641	+		DDA3937_RS16890	0.62	-0.4
3,840,668	+		DDA3937_RS16890	0.65	+0.1
3,840,668	+		DDA3937_RS16890	0.65	+0.1
3,840,669	-		DDA3937_RS16890	0.65	-1.0
3,840,669	-		DDA3937_RS16890	0.65	-0.5
3,840,811	+		DDA3937_RS16890	0.79	-0.6
3,840,811	+		DDA3937_RS16890	0.79	-0.6
3,840,811	+		DDA3937_RS16890	0.79	+0.7
3,840,812	-		DDA3937_RS16890	0.79	-1.2
3,840,812	-		DDA3937_RS16890	0.79	+0.3
3,841,029	+				-0.2
3,841,029	+				+0.4
3,841,029	+				+0.1
3,841,030	-				-0.3
3,841,030	-				-0.1
3,841,030	-				+0.5
3,841,541	-				-0.6
3,841,541	-				-1.6
3,841,544	-				+0.1
3,841,544	-				-0.5