Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,666,046	+				+0.3
3,666,046	+				+0.2
3,666,046	+				-0.3
3,666,046	+				-0.1
3,666,046	+				+0.8
3,666,046	+				-0.1
3,666,046	+				-0.0
3,666,047	-				-1.0
3,666,047	-				+1.6
3,666,047	-				+0.1
3,666,047	-				-1.3
3,666,094	+				+1.5
3,666,252	+				-0.0
3,666,252	+				-1.7
3,666,252	+				-0.1
3,666,252	+				+0.5
3,666,252	+				-1.7
3,666,252	+				-0.3
3,666,252	+				+0.0
3,666,252	+				-1.3
3,666,252	+				-0.2
3,666,253	-				-0.2
3,666,253	-				+0.5
3,666,253	-				-0.6
3,666,253	-				-0.1
3,666,253	-				-0.2
3,666,253	-				+0.5
3,666,253	-				-0.3
3,666,253	-				-1.3
3,666,253	-				-0.3
3,666,255	+				+0.5
3,666,256	-				+0.7
3,666,361	+				-0.5
3,666,362	-				+0.0
3,666,362	-				-0.2
3,666,392	-				+0.3
3,666,392	-				-0.6
3,666,630	-		DDA3937_RS16045	0.37	-2.5
3,667,076	-				-1.3
3,667,076	-				-1.1
3,667,101	+		DDA3937_RS16050	0.10	-0.9
3,667,102	-		DDA3937_RS16050	0.10	-0.0
3,667,115	-		DDA3937_RS16050	0.13	-0.4
3,667,131	-				+1.3
3,667,150	+		DDA3937_RS16050	0.19	-1.3
3,667,150	+		DDA3937_RS16050	0.19	-2.7
3,667,159	+		DDA3937_RS16050	0.20	-1.9
3,667,623	+				-0.2
3,667,623	+				-0.5
3,667,624	-				-0.3
3,667,624	-				-0.2
3,667,665	+				+0.3
3,667,665	+				+0.4
3,667,666	-				+0.9
3,667,795	+		DDA3937_RS16055	0.21	+0.2
3,667,795	+		DDA3937_RS16055	0.21	+0.1
3,667,796	-		DDA3937_RS16055	0.21	-0.1
3,667,796	-		DDA3937_RS16055	0.21	-0.7
3,667,796	-		DDA3937_RS16055	0.21	-0.3
3,667,846	+		DDA3937_RS16055	0.28	-1.0
3,667,846	+		DDA3937_RS16055	0.28	-0.3
3,667,846	+		DDA3937_RS16055	0.28	+0.1
3,667,846	+		DDA3937_RS16055	0.28	-0.9
3,667,846	+		DDA3937_RS16055	0.28	-0.2
3,667,846	+		DDA3937_RS16055	0.28	-0.2
3,667,846	+		DDA3937_RS16055	0.28	-1.5
3,667,847	-		DDA3937_RS16055	0.28	-0.3
3,667,847	-		DDA3937_RS16055	0.28	-0.0
3,667,849	+		DDA3937_RS16055	0.28	+0.3
3,667,849	+		DDA3937_RS16055	0.28	+0.5
3,667,849	+		DDA3937_RS16055	0.28	-0.6
3,667,850	-		DDA3937_RS16055	0.28	-1.5
3,668,064	+		DDA3937_RS16055	0.58	+0.1
3,668,064	+		DDA3937_RS16055	0.58	+0.2
3,668,064	+		DDA3937_RS16055	0.58	-1.8
3,668,064	+		DDA3937_RS16055	0.58	+1.3
3,668,072	+		DDA3937_RS16055	0.59	+0.5
3,668,072	+		DDA3937_RS16055	0.59	-1.5
3,668,072	+		DDA3937_RS16055	0.59	+0.1
3,668,072	+		DDA3937_RS16055	0.59	-0.8
3,668,073	-		DDA3937_RS16055	0.59	+1.5
3,668,124	+		DDA3937_RS16055	0.66	-0.4
3,668,188	+		DDA3937_RS16055	0.75	+0.3
3,668,188	+		DDA3937_RS16055	0.75	-0.4
3,668,188	+		DDA3937_RS16055	0.75	-0.3
3,668,188	+		DDA3937_RS16055	0.75	-0.6
3,668,188	+		DDA3937_RS16055	0.75	-2.3
3,668,188	+		DDA3937_RS16055	0.75	+0.2
3,668,189	-		DDA3937_RS16055	0.75	-1.3
3,668,189	-		DDA3937_RS16055	0.75	+0.2
3,668,189	-		DDA3937_RS16055	0.75	-0.3
3,668,192	+		DDA3937_RS16055	0.76	-1.0
3,668,192	+		DDA3937_RS16055	0.76	-0.7
3,668,192	+		DDA3937_RS16055	0.76	-2.3
3,668,192	+		DDA3937_RS16055	0.76	-0.1
3,668,192	+		DDA3937_RS16055	0.76	-0.3
3,668,193	-		DDA3937_RS16055	0.76	-1.5
3,668,193	-		DDA3937_RS16055	0.76	+0.4
3,668,193	-		DDA3937_RS16055	0.76	+0.1
3,668,193	-		DDA3937_RS16055	0.76	-0.2
3,668,193	-		DDA3937_RS16055	0.76	+0.3
3,668,193	-		DDA3937_RS16055	0.76	-0.7
3,668,288	-		DDA3937_RS16055	0.89	-0.4
3,668,295	+		DDA3937_RS16055	0.90	+0.7
3,668,295	+		DDA3937_RS16055	0.90	+0.3
3,668,295	+		DDA3937_RS16055	0.90	+0.1
3,668,295	+		DDA3937_RS16055	0.90	+0.4
3,668,295	+		DDA3937_RS16055	0.90	-0.5
3,668,295	+		DDA3937_RS16055	0.90	-0.5
3,668,296	-				-0.7
3,668,296	-				+0.0
3,668,296	-				+0.9
3,668,296	-				-0.1
3,668,296	-				+0.7
3,668,326	+				-1.3
3,668,326	+				-0.3
3,668,336	+				-0.1
3,668,337	-				+0.3
3,668,337	-				-1.7
3,668,373	+				+0.1
3,668,374	-				+0.3
3,668,374	-				+0.0
3,668,376	+				+0.2
3,668,376	+				-2.4
3,668,377	-				-0.2
3,668,423	+				+0.3
3,668,423	+				-1.6
3,668,431	+				-1.7
3,668,451	+				-1.0
3,668,451	+				-0.3
3,668,451	+				+1.1
3,668,451	+				-0.3
3,668,452	-				-3.1
3,668,452	-				-0.3
3,668,452	-				-1.0
3,668,452	-				-0.9
3,668,452	-				+0.8
3,668,452	-				-0.7
3,668,522	-		DDA3937_RS16060	0.14	-0.2
3,668,536	-		DDA3937_RS16060	0.16	-0.2
3,668,580	-		DDA3937_RS16060	0.22	-0.3