Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15945

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,647,572	+				+0.5
3,647,592	+				-0.7
3,647,611	+				+0.0
3,647,611	+				-1.5
3,647,611	+				-0.4
3,647,612	-				+1.3
3,647,612	-				-0.4
3,647,612	-				-1.5
3,647,612	-				-1.3
3,647,683	+				-0.1
3,647,684	-		DDA3937_RS15940	0.10	-0.6
3,647,684	-		DDA3937_RS15940	0.10	-0.1
3,647,890	+		DDA3937_RS15940	0.33	+0.6
3,647,891	-		DDA3937_RS15940	0.33	-0.2
3,647,891	-		DDA3937_RS15940	0.33	-0.0
3,647,893	+		DDA3937_RS15940	0.33	-0.2
3,647,894	-				+1.9
3,647,894	-		DDA3937_RS15940	0.33	-0.6
3,647,938	+		DDA3937_RS15940	0.38	-0.8
3,647,939	-		DDA3937_RS15940	0.38	-0.5
3,647,939	-		DDA3937_RS15940	0.38	-0.9
3,648,078	+		DDA3937_RS15940	0.53	-0.3
3,648,078	+		DDA3937_RS15940	0.53	+0.1
3,648,079	-		DDA3937_RS15940	0.53	-1.7
3,648,079	-		DDA3937_RS15940	0.53	+0.6
3,648,079	-		DDA3937_RS15940	0.53	+0.9
3,648,079	-		DDA3937_RS15940	0.53	-0.1
3,648,082	-		DDA3937_RS15940	0.54	-0.9
3,648,109	+		DDA3937_RS15940	0.57	+0.6
3,648,109	+		DDA3937_RS15940	0.57	-0.0
3,648,109	+		DDA3937_RS15940	0.57	-1.3
3,648,110	-		DDA3937_RS15940	0.57	+0.2
3,648,162	-		DDA3937_RS15940	0.63	-1.1
3,648,201	-		DDA3937_RS15940	0.67	+0.0
3,648,201	-		DDA3937_RS15940	0.67	-0.3
3,648,208	+		DDA3937_RS15940	0.68	-1.0
3,648,209	-		DDA3937_RS15940	0.68	-0.4
3,648,239	-		DDA3937_RS15940	0.71	-0.1
3,648,239	-		DDA3937_RS15940	0.71	-2.1
3,648,239	-		DDA3937_RS15940	0.71	-0.3
3,648,239	-		DDA3937_RS15940	0.71	-0.8
3,648,239	-		DDA3937_RS15940	0.71	+0.0
3,648,239	-		DDA3937_RS15940	0.71	-0.6
3,648,462	+				+0.1
3,648,462	+				+0.5
3,648,462	+				-0.8
3,648,463	-				-2.0
3,648,476	+				+0.4
3,648,510	+				-0.0
3,648,510	+				+0.8
3,648,510	+				+1.0
3,648,511	-				+0.0
3,648,511	-				+0.2
3,648,511	-				-2.4
3,648,511	-				-0.3
3,648,511	-				-1.3
3,648,511	-				+0.3
3,648,511	-				-1.3
3,648,511	-				-0.1
3,648,511	-				+0.2
3,648,511	-				-1.4
3,648,566	+				+0.9
3,648,566	+				+0.6
3,648,566	+				+2.1
3,648,566	+				-0.1
3,648,588	-				+0.7
3,648,605	-				-0.2
3,648,702	-				-0.4
3,648,721	+				-2.0
3,648,721	+		DDA3937_RS15945	0.11	+0.5
3,648,722	-		DDA3937_RS15945	0.11	+0.3
3,648,747	+		DDA3937_RS15945	0.13	-1.3
3,648,756	+		DDA3937_RS15945	0.13	-1.7
3,648,756	+		DDA3937_RS15945	0.13	-0.1
3,648,764	-		DDA3937_RS15945	0.14	-0.7
3,649,005	-		DDA3937_RS15945	0.31	-1.0
3,649,005	-		DDA3937_RS15945	0.31	-0.7
3,649,005	-		DDA3937_RS15945	0.31	-1.5
3,649,005	-				-0.1
3,649,034	+		DDA3937_RS15945	0.33	-1.8
3,649,080	+		DDA3937_RS15945	0.36	+0.2
3,649,083	+		DDA3937_RS15945	0.37	-1.0
3,649,362	+		DDA3937_RS15945	0.56	-0.4
3,649,362	+		DDA3937_RS15945	0.56	-0.0
3,649,363	-		DDA3937_RS15945	0.56	-0.8
3,649,381	-		DDA3937_RS15945	0.58	-0.7
3,649,419	+		DDA3937_RS15945	0.60	+0.1
3,649,420	-		DDA3937_RS15945	0.61	-0.7
3,649,420	-		DDA3937_RS15945	0.61	-1.8
3,649,691	+		DDA3937_RS15945	0.80	-0.0
3,649,822	+		DDA3937_RS15945	0.89	-2.0
3,649,822	+		DDA3937_RS15945	0.89	-0.3
3,649,882	+				-0.4
3,649,882	+				-1.3
3,649,883	-				-0.3
3,649,883	-				+0.5
3,650,130	-		DDA3937_RS15950	0.33	+1.8
3,650,526	+				-0.7
3,650,532	+				-1.7
3,650,539	-				-0.3
3,650,569	+				+0.3
3,650,570	-				-1.3
3,650,570	-				-0.0
3,650,570	-				-1.4
3,650,634	-				+0.9
3,650,691	+				+0.8
3,650,691	+				+0.7
3,650,692	-				-0.2
3,650,713	+		DDA3937_RS15955	0.12	-0.1
3,650,714	-		DDA3937_RS15955	0.12	+1.6
3,650,762	+		DDA3937_RS15955	0.18	+0.6
3,650,770	+		DDA3937_RS15955	0.19	+0.6
3,650,810	+		DDA3937_RS15955	0.24	-1.4
3,650,879	+		DDA3937_RS15955	0.33	+0.3
3,650,880	-		DDA3937_RS15955	0.33	+0.9
3,650,942	+		DDA3937_RS15955	0.41	-0.4
3,650,942	+		DDA3937_RS15955	0.41	-0.5
3,650,943	-		DDA3937_RS15955	0.41	-0.6
3,650,943	-		DDA3937_RS15955	0.41	-0.7
3,650,945	+				-0.3
3,650,945	+		DDA3937_RS15955	0.41	+0.6
3,650,945	+		DDA3937_RS15955	0.41	-0.6
3,650,945	+		DDA3937_RS15955	0.41	+0.2
3,650,946	-		DDA3937_RS15955	0.41	-1.8
3,650,946	-		DDA3937_RS15955	0.41	+0.0
3,650,946	-		DDA3937_RS15955	0.41	-0.3