Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15910

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,638,459	-				-2.0
3,638,528	+		DDA3937_RS15905	0.15	+0.1
3,638,529	-		DDA3937_RS15905	0.15	+0.6
3,638,625	-		DDA3937_RS15905	0.26	+0.5
3,638,767	+		DDA3937_RS15905	0.41	-1.4
3,638,767	+		DDA3937_RS15905	0.41	-0.5
3,638,767	+		DDA3937_RS15905	0.41	+0.8
3,638,767	+		DDA3937_RS15905	0.41	+3.5
3,638,767	+		DDA3937_RS15905	0.41	-0.1
3,638,768	-		DDA3937_RS15905	0.41	+0.3
3,638,768	-		DDA3937_RS15905	0.41	+0.8
3,638,768	-		DDA3937_RS15905	0.41	+0.3
3,638,798	+		DDA3937_RS15905	0.45	-1.1
3,638,799	-		DDA3937_RS15905	0.45	+0.3
3,638,913	-		DDA3937_RS15905	0.57	+0.3
3,639,091	+		DDA3937_RS15905	0.77	-0.7
3,639,141	+		DDA3937_RS15905	0.82	+0.1
3,639,141	+		DDA3937_RS15905	0.82	-0.3
3,639,141	+				+2.9
3,639,141	+		DDA3937_RS15905	0.82	-0.4
3,639,142	-		DDA3937_RS15905	0.82	+0.2
3,639,142	-		DDA3937_RS15905	0.82	-0.4
3,639,142	-		DDA3937_RS15905	0.82	-0.2
3,639,142	-		DDA3937_RS15905	0.82	+0.5
3,639,147	+		DDA3937_RS15905	0.83	-0.0
3,639,302	+				-0.9
3,639,302	+				+0.9
3,639,302	+				+0.8
3,639,302	+				-0.0
3,639,302	+				+1.0
3,639,303	-				+0.8
3,639,307	+				+0.1
3,639,356	+				+0.3
3,639,356	+				-0.7
3,639,357	-				-0.5
3,639,357	-				+0.3
3,639,378	+				+0.5
3,639,378	+				-0.5
3,639,378	+				-0.3
3,639,378	+				-1.3
3,639,378	+				+0.3
3,639,378	+				-1.4
3,639,379	-				-1.0
3,639,379	-				+0.2
3,639,379	-				-0.5
3,639,382	+				-0.7
3,639,383	-				+0.3
3,639,383	-				-1.7
3,639,383	-				-1.3
3,639,472	-		DDA3937_RS15910	0.20	-0.9
3,639,575	-		DDA3937_RS15910	0.33	-1.0
3,639,977	-		DDA3937_RS15910	0.83	-0.2
3,640,099	+				+0.0
3,640,100	-				+0.1
3,640,133	+				-1.3
3,640,134	-				-1.3
3,640,134	-				+0.3
3,640,134	-				-2.2
3,640,180	+				-2.0
3,640,181	-				-2.0
3,640,193	-				+0.1
3,640,207	-				-2.3
3,640,212	+				+1.7
3,640,212	+				-0.0
3,640,212	+				-2.3
3,640,213	-				-0.6
3,640,213	-				-0.6
3,640,257	+				+1.2
3,640,316	+				-0.5
3,640,317	-				-0.0
3,640,317	-				-1.5
3,640,317	-				-0.0
3,640,320	-				-0.3
3,640,320	-				+0.2
3,640,332	+				-1.7
3,640,343	+				-0.1
3,640,343	+				-0.5
3,640,344	-				-0.1
3,640,344	-				+0.3
3,640,344	-				-0.3
3,640,616	+		DDA3937_RS15915	0.11	-2.0
3,640,617	-		DDA3937_RS15915	0.11	-1.7
3,640,617	-		DDA3937_RS15915	0.11	+0.3
3,640,889	+		DDA3937_RS15915	0.22	+0.9
3,640,889	+		DDA3937_RS15915	0.22	+0.0