Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,564,452	-		DDA3937_RS15570	0.24	-0.3
3,564,467	+		DDA3937_RS15570	0.25	-0.6
3,564,467	+		DDA3937_RS15570	0.25	-0.4
3,564,468	-		DDA3937_RS15570	0.25	-1.7
3,564,470	+		DDA3937_RS15570	0.25	+0.9
3,564,471	-		DDA3937_RS15570	0.25	+0.0
3,564,471	-		DDA3937_RS15570	0.25	-0.5
3,564,593	+		DDA3937_RS15570	0.37	+0.0
3,564,707	+		DDA3937_RS15570	0.47	+0.6
3,564,708	-		DDA3937_RS15570	0.47	+1.8
3,564,756	+		DDA3937_RS15570	0.52	+0.8
3,564,798	+		DDA3937_RS15570	0.56	-0.9
3,564,798	+		DDA3937_RS15570	0.56	-0.1
3,564,799	-		DDA3937_RS15570	0.56	+0.2
3,564,878	+		DDA3937_RS15570	0.63	-0.4
3,564,878	+		DDA3937_RS15570	0.63	-0.1
3,564,879	-		DDA3937_RS15570	0.63	-1.3
3,565,114	+		DDA3937_RS15570	0.85	-0.4
3,565,114	+		DDA3937_RS15570	0.85	-0.6
3,565,115	-		DDA3937_RS15570	0.85	-0.6
3,565,274	+				-0.7
3,565,274	+				-0.1
3,565,274	+				-0.4
3,565,274	+				-0.7
3,565,274	+				-1.0
3,565,275	-				-0.7
3,565,275	-				-0.9
3,565,275	-				-2.5
3,565,275	-				+2.1
3,565,275	-				-0.0
3,565,275	-				-0.2
3,565,275	-				+1.3
3,565,275	-				+0.3
3,565,275	-				+0.3
3,565,275	-				-0.1
3,565,275	-				-0.7
3,565,275	-				-1.1
3,565,370	+		DDA3937_RS15575	0.12	-0.4
3,565,476	-		DDA3937_RS15575	0.25	+0.0
3,565,480	+		DDA3937_RS15575	0.26	-1.5
3,565,480	+		DDA3937_RS15575	0.26	-0.5
3,565,481	-		DDA3937_RS15575	0.26	+0.0
3,565,519	+		DDA3937_RS15575	0.31	-0.7
3,565,519	+		DDA3937_RS15575	0.31	+0.9
3,565,519	+		DDA3937_RS15575	0.31	-2.3
3,565,519	+		DDA3937_RS15575	0.31	-2.5
3,565,519	+		DDA3937_RS15575	0.31	-0.3
3,565,519	+		DDA3937_RS15575	0.31	+0.1
3,565,520	-		DDA3937_RS15575	0.31	-0.6
3,565,520	-		DDA3937_RS15575	0.31	-0.8
3,565,521	+		DDA3937_RS15575	0.31	-0.9
3,565,521	+		DDA3937_RS15575	0.31	-0.4
3,565,521	+		DDA3937_RS15575	0.31	-1.1
3,565,521	+		DDA3937_RS15575	0.31	+0.0
3,565,522	-		DDA3937_RS15575	0.31	+0.4
3,565,522	-		DDA3937_RS15575	0.31	-0.0
3,565,522	-		DDA3937_RS15575	0.31	+0.8
3,565,522	-		DDA3937_RS15575	0.31	-1.5
3,565,522	-		DDA3937_RS15575	0.31	-0.4
3,565,522	-		DDA3937_RS15575	0.31	-1.1
3,565,522	-		DDA3937_RS15575	0.31	-0.5
3,565,522	-		DDA3937_RS15575	0.31	-0.6
3,565,522	-		DDA3937_RS15575	0.31	-0.5
3,565,522	-		DDA3937_RS15575	0.31	+0.2
3,565,522	-		DDA3937_RS15575	0.31	-0.9
3,565,522	-		DDA3937_RS15575	0.31	-0.5
3,565,575	-		DDA3937_RS15575	0.38	-0.5
3,565,575	-		DDA3937_RS15575	0.38	+0.0
3,565,631	-		DDA3937_RS15575	0.45	+0.7
3,565,677	+		DDA3937_RS15575	0.51	+1.7
3,565,677	+		DDA3937_RS15575	0.51	-2.5
3,565,677	+		DDA3937_RS15575	0.51	-1.7
3,565,791	+		DDA3937_RS15575	0.65	-0.2
3,565,792	-		DDA3937_RS15575	0.65	-0.9
3,565,792	-		DDA3937_RS15575	0.65	-1.9
3,565,816	+		DDA3937_RS15575	0.68	-0.4
3,565,817	-		DDA3937_RS15575	0.68	+0.8
3,565,841	+		DDA3937_RS15575	0.71	+0.7
3,565,842	-		DDA3937_RS15575	0.72	-0.7
3,565,853	-		DDA3937_RS15575	0.73	-0.1
3,565,853	-		DDA3937_RS15575	0.73	+0.8
3,565,858	+		DDA3937_RS15575	0.74	+0.0
3,565,858	+		DDA3937_RS15575	0.74	-0.7
3,565,858	+		DDA3937_RS15575	0.74	+0.0
3,565,859	-		DDA3937_RS15575	0.74	-0.6
3,565,859	-		DDA3937_RS15575	0.74	-0.4
3,565,980	+		DDA3937_RS15575	0.89	-0.3
3,565,980	+		DDA3937_RS15575	0.89	-0.4
3,565,980	+		DDA3937_RS15575	0.89	-0.6
3,565,981	-		DDA3937_RS15575	0.89	-0.2
3,565,981	-		DDA3937_RS15575	0.89	-0.1
3,566,065	-				-0.1
3,566,089	+				-0.6
3,566,130	+				+0.8
3,566,159	-				-0.1
3,566,377	-		DDA3937_RS15580	0.15	+0.2
3,566,377	-		DDA3937_RS15580	0.15	-0.3
3,566,377	-		DDA3937_RS15580	0.15	-0.9
3,566,392	+		DDA3937_RS15580	0.16	-0.2
3,566,392	+		DDA3937_RS15580	0.16	+0.6
3,566,392	+		DDA3937_RS15580	0.16	-0.1
3,566,393	-		DDA3937_RS15580	0.16	+0.3
3,566,526	+		DDA3937_RS15580	0.28	+0.7
3,566,527	-		DDA3937_RS15580	0.28	-0.2
3,566,527	-		DDA3937_RS15580	0.28	-0.1
3,566,527	-		DDA3937_RS15580	0.28	-1.5
3,566,527	-		DDA3937_RS15580	0.28	+0.7
3,566,751	+		DDA3937_RS15580	0.48	+0.0
3,566,751	+		DDA3937_RS15580	0.48	+0.1
3,566,751	+		DDA3937_RS15580	0.48	-0.8
3,566,751	+		DDA3937_RS15580	0.48	-0.4
3,566,751	+		DDA3937_RS15580	0.48	+0.1
3,566,752	-		DDA3937_RS15580	0.48	-0.3
3,566,752	-		DDA3937_RS15580	0.48	+0.5
3,566,846	-		DDA3937_RS15580	0.57	-0.7
3,567,061	+		DDA3937_RS15580	0.76	-0.4