Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,411,258	+		DDA3937_RS14865	0.34	+0.1
3,411,258	+		DDA3937_RS14865	0.34	-0.6
3,411,259	-		DDA3937_RS14865	0.34	+0.6
3,411,269	+		DDA3937_RS14865	0.35	+0.4
3,411,270	-		DDA3937_RS14865	0.35	-0.8
3,411,409	+		DDA3937_RS14865	0.48	-0.0
3,411,409	+		DDA3937_RS14865	0.48	-0.1
3,411,409	+		DDA3937_RS14865	0.48	+0.1
3,411,410	-		DDA3937_RS14865	0.48	-0.9
3,411,410	-		DDA3937_RS14865	0.48	-0.6
3,411,410	-		DDA3937_RS14865	0.48	-0.4
3,411,412	-		DDA3937_RS14865	0.48	-0.1
3,411,412	-		DDA3937_RS14865	0.48	+2.8
3,411,412	-		DDA3937_RS14865	0.48	-3.1
3,411,413	+		DDA3937_RS14865	0.48	+0.9
3,411,413	+		DDA3937_RS14865	0.48	-0.2
3,411,414	-		DDA3937_RS14865	0.48	+0.0
3,411,522	+		DDA3937_RS14865	0.58	-0.5
3,411,522	+		DDA3937_RS14865	0.58	-1.4
3,411,523	-		DDA3937_RS14865	0.58	-0.6
3,411,523	-		DDA3937_RS14865	0.58	-0.2
3,411,523	-		DDA3937_RS14865	0.58	-0.3
3,411,555	+		DDA3937_RS14865	0.61	+1.1
3,411,555	+		DDA3937_RS14865	0.61	-1.6
3,411,555	+		DDA3937_RS14865	0.61	+0.2
3,411,556	-		DDA3937_RS14865	0.61	-0.2
3,411,571	+		DDA3937_RS14865	0.62	+0.1
3,411,606	+		DDA3937_RS14865	0.65	+0.4
3,411,735	+		DDA3937_RS14865	0.77	+0.4
3,411,791	-		DDA3937_RS14865	0.82	+0.7
3,411,805	+		DDA3937_RS14865	0.83	-1.1
3,411,880	+		DDA3937_RS14865	0.90	-0.9
3,411,880	+		DDA3937_RS14865	0.90	+0.0
3,411,880	+		DDA3937_RS14865	0.90	+0.7
3,411,881	-		DDA3937_RS14865	0.90	-0.3
3,411,881	-		DDA3937_RS14865	0.90	+0.0
3,411,889	-				-0.6
3,411,953	-				+0.2
3,411,994	-				-0.7
3,411,994	-				-0.2
3,412,019	+				-0.6
3,412,020	-				-0.0
3,412,070	+				+0.6
3,412,152	+				+0.2
3,412,153	-				-0.0
3,412,153	-				-0.6
3,412,153	-				-0.6
3,412,222	+				+0.1
3,412,222	+				-1.4
3,412,222	+				-0.1
3,412,223	-				-0.4
3,412,223	-				-0.7
3,412,223	-				-0.1
3,412,223	-				+0.5
3,412,223	-				+0.4
3,412,301	-		DDA3937_RS14870	0.35	+0.0
3,412,303	+		DDA3937_RS14870	0.36	-0.3
3,412,304	-		DDA3937_RS14870	0.37	+0.0
3,412,452	+				-0.7
3,412,452	+				-0.8
3,412,452	+				-0.4
3,412,453	-				-0.5
3,412,459	+				-0.4
3,412,460	-				+0.8
3,412,467	+				+0.3
3,412,467	+				+0.0
3,412,467	+				-2.8
3,412,468	-				-2.1
3,412,468	-				-0.2
3,412,474	+				+0.4
3,412,475	-				-0.6
3,412,475	-				+0.2
3,412,482	+				-0.2
3,412,482	+				+0.9
3,412,483	-				+1.2
3,412,500	+				-1.6
3,412,527	-				+0.2
3,412,622	-				+0.0
3,412,659	+				+0.6
3,412,659	+				+0.2
3,412,730	+				-1.1
3,412,730	+				-0.5
3,412,730	+				-0.2
3,412,730	+				+1.2
3,412,730	+				-1.6
3,412,731	-				-1.1
3,412,731	-				+0.2
3,412,731	-				-1.6
3,412,731	-				+0.0
3,412,731	-				-0.8
3,412,752	+				+1.4
3,412,752	+				+0.1
3,412,752	+				+0.0
3,412,753	-				+0.2
3,412,753	-				-0.8
3,412,753	-				-1.1
3,412,860	+		DDA3937_RS14875	0.11	-0.1
3,412,905	+		DDA3937_RS14875	0.15	-0.2
3,412,906	-		DDA3937_RS14875	0.15	-0.6
3,412,948	+		DDA3937_RS14875	0.19	-2.4
3,412,966	-		DDA3937_RS14875	0.21	-0.2
3,413,073	-		DDA3937_RS14875	0.30	+0.5
3,413,167	+		DDA3937_RS14875	0.39	+0.2
3,413,343	+		DDA3937_RS14875	0.54	+0.4
3,413,344	-		DDA3937_RS14875	0.55	+0.1