Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14860

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,409,074	-				+0.4
3,409,114	-				-0.6
3,409,158	-		DDA3937_RS23305	0.11	-2.5
3,409,162	+		DDA3937_RS23305	0.11	-1.8
3,409,192	-		DDA3937_RS23305	0.17	-1.8
3,409,393	-		DDA3937_RS23305	0.57	+0.0
3,409,421	+		DDA3937_RS23305	0.63	-0.5
3,409,569	+				-0.4
3,409,569	+				+0.2
3,409,582	+				-0.4
3,409,590	+				-1.0
3,409,608	+				-0.6
3,409,655	-				+0.2
3,409,669	-				-1.4
3,409,677	+				-0.0
3,409,678	-				-0.3
3,409,705	+				-0.7
3,409,711	+				+0.4
3,409,711	+				-0.6
3,409,711	+				-0.8
3,409,712	-				-0.2
3,409,712	-				+0.2
3,409,712	-				+2.1
3,409,712	-				-0.8
3,409,712	-				-1.1
3,409,712	-				-0.3
3,409,712	-				-0.6
3,409,712	-				-0.8
3,409,714	-				-0.6
3,409,714	-				-1.1
3,409,714	-				-1.7
3,409,745	+				-0.8
3,409,747	+				+0.4
3,409,748	-				-0.8
3,409,748	-				-0.5
3,409,748	-				-1.1
3,409,803	+				-0.7
3,409,804	-				+0.1
3,409,805	+				+0.4
3,409,806	-				+0.9
3,409,808	+				+0.5
3,409,808	+				-0.2
3,409,808	+				-0.0
3,409,808	+				-0.4
3,409,808	+				+0.3
3,409,808	+				-0.2
3,409,808	+				-0.1
3,409,808	+				+0.2
3,409,809	-				+0.0
3,409,809	-				-0.7
3,409,809	-				-0.2
3,409,809	-				-1.1
3,409,809	-				-0.6
3,409,809	-				+0.2
3,409,809	-				+0.2
3,409,812	-				-0.0
3,409,812	-				+1.2
3,409,927	+				-0.5
3,409,928	-				-0.5
3,409,932	-				+1.2
3,409,983	+				-0.1
3,409,985	+				-0.2
3,409,986	-				+0.1
3,409,986	-				+0.6
3,410,027	-				+0.5
3,410,027	-				-0.3
3,410,229	+		DDA3937_RS14860	0.54	-0.2
3,410,231	+		DDA3937_RS14860	0.55	+0.3
3,410,231	+		DDA3937_RS14860	0.55	-3.1
3,410,231	+		DDA3937_RS14860	0.55	-0.1
3,410,232	-		DDA3937_RS14860	0.55	-0.3
3,410,232	-		DDA3937_RS14860	0.55	-2.3
3,410,232	-		DDA3937_RS14860	0.55	+0.2
3,410,232	-		DDA3937_RS14860	0.55	-1.8
3,410,232	-		DDA3937_RS14860	0.55	-1.0
3,410,232	-		DDA3937_RS14860	0.55	+0.5
3,410,232	-		DDA3937_RS14860	0.55	-1.1
3,410,237	-		DDA3937_RS14860	0.57	-0.4
3,410,259	+		DDA3937_RS14860	0.63	-0.4
3,410,259	+		DDA3937_RS14860	0.63	+0.6
3,410,259	+		DDA3937_RS14860	0.63	-0.8
3,410,260	-		DDA3937_RS14860	0.64	-1.0
3,410,260	-		DDA3937_RS14860	0.64	-0.2
3,410,291	+		DDA3937_RS14860	0.74	-1.0
3,410,291	+		DDA3937_RS14860	0.74	+0.8
3,410,292	-		DDA3937_RS14860	0.74	-0.6
3,410,292	-		DDA3937_RS14860	0.74	+0.4
3,410,295	+		DDA3937_RS14860	0.75	-0.9
3,410,295	+				-2.1
3,410,295	+		DDA3937_RS14860	0.75	+0.8
3,410,296	-		DDA3937_RS14860	0.75	+0.2
3,410,296	-		DDA3937_RS14860	0.75	-0.2
3,410,296	-		DDA3937_RS14860	0.75	-0.2
3,410,296	-		DDA3937_RS14860	0.75	-0.3
3,410,296	-		DDA3937_RS14860	0.75	-0.5
3,410,305	+		DDA3937_RS14860	0.78	-0.1
3,410,305	+		DDA3937_RS14860	0.78	-0.1
3,410,306	-		DDA3937_RS14860	0.78	-1.4
3,410,333	+		DDA3937_RS14860	0.87	+0.7
3,410,334	-		DDA3937_RS14860	0.87	-0.5
3,410,353	-				-0.5
3,410,372	-				+0.4
3,410,412	+				-1.4
3,410,413	-				-0.1
3,410,431	+				-0.2
3,410,431	+				-0.8
3,410,431	+				-0.1
3,410,432	-				+0.2
3,410,560	+				-1.0
3,410,591	+				-1.3
3,410,591	+				-0.8
3,410,592	-				-0.4
3,410,592	-				-3.0
3,410,592	-				+0.0
3,410,837	+				-0.1
3,410,838	-				-0.4
3,410,838	-				-0.4
3,410,873	+				+0.9
3,410,880	+				-0.9
3,410,894	+				+0.6
3,410,942	-				-1.0
3,411,118	+		DDA3937_RS14865	0.22	-1.0
3,411,118	+		DDA3937_RS14865	0.22	-0.1
3,411,118	+		DDA3937_RS14865	0.22	-0.0
3,411,118	+		DDA3937_RS14865	0.22	-0.5
3,411,258	+		DDA3937_RS14865	0.34	+0.1
3,411,258	+		DDA3937_RS14865	0.34	-0.6
3,411,259	-		DDA3937_RS14865	0.34	+0.6
3,411,269	+		DDA3937_RS14865	0.35	+0.4
3,411,270	-		DDA3937_RS14865	0.35	-0.8