Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14755

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,387,614	-		DDA3937_RS14750	0.11	-1.6
3,387,781	-		DDA3937_RS14750	0.31	-0.7
3,387,781	-		DDA3937_RS14750	0.31	+0.1
3,387,801	+		DDA3937_RS14750	0.33	-0.5
3,387,802	-		DDA3937_RS14750	0.33	-0.5
3,387,847	+		DDA3937_RS14750	0.39	-0.8
3,387,909	-		DDA3937_RS14750	0.46	-1.8
3,387,999	-		DDA3937_RS14750	0.56	+0.2
3,388,182	+		DDA3937_RS14750	0.78	-1.4
3,388,334	-				+0.1
3,388,392	+				+0.8
3,388,416	+				+0.0
3,388,416	+				-0.4
3,388,417	-				-1.2
3,388,524	+				+0.2
3,388,556	-				-0.3
3,388,556	-				-0.5
3,388,739	+		DDA3937_RS14755	0.38	+0.3
3,388,740	-		DDA3937_RS14755	0.38	+0.4
3,388,945	+		DDA3937_RS14755	0.80	-0.2
3,388,945	+		DDA3937_RS14755	0.80	-0.1
3,388,945	+		DDA3937_RS14755	0.80	+0.5
3,388,946	-		DDA3937_RS14755	0.80	-0.2
3,388,946	-		DDA3937_RS14755	0.80	-1.0
3,388,946	-		DDA3937_RS14755	0.80	-0.4
3,388,946	-		DDA3937_RS14755	0.80	+0.2
3,388,946	-		DDA3937_RS14755	0.80	+0.1
3,388,946	-		DDA3937_RS14755	0.80	-0.2
3,388,946	-		DDA3937_RS14755	0.80	-0.5
3,388,948	+		DDA3937_RS14755	0.81	-0.5
3,388,948	+		DDA3937_RS14755	0.81	-0.3
3,388,948	+		DDA3937_RS14755	0.81	+0.7
3,388,948	+		DDA3937_RS14755	0.81	+0.7
3,388,948	+		DDA3937_RS14755	0.81	-0.5
3,388,948	+		DDA3937_RS14755	0.81	+0.3
3,388,948	+		DDA3937_RS14755	0.81	-0.6
3,388,948	+		DDA3937_RS14755	0.81	-1.2
3,388,948	+		DDA3937_RS14755	0.81	-1.1
3,388,948	+		DDA3937_RS14755	0.81	-0.6
3,388,948	+		DDA3937_RS14755	0.81	-1.6
3,388,949	-		DDA3937_RS14755	0.81	-0.6
3,388,949	-		DDA3937_RS14755	0.81	+1.0
3,388,949	-		DDA3937_RS14755	0.81	+0.5
3,388,966	-		DDA3937_RS14755	0.84	-0.1
3,388,966	-		DDA3937_RS14755	0.84	+0.1
3,388,966	-		DDA3937_RS14755	0.84	+1.3
3,389,013	+				+0.2
3,389,013	+				-0.8
3,389,014	-				-1.4
3,389,014	-				-0.8
3,389,014	-				+0.3
3,389,060	+				-0.8
3,389,061	-				-0.6
3,389,118	+				-0.9
3,389,118	+				-0.6
3,389,119	-				+0.2
3,389,119	-				+0.9
3,389,158	-				+1.5
3,389,158	-				+0.6
3,389,158	-				-0.5
3,389,377	-		DDA3937_RS14760	0.28	+0.1
3,389,377	-		DDA3937_RS14760	0.28	+0.6
3,389,377	-		DDA3937_RS14760	0.28	-1.1
3,389,377	-		DDA3937_RS14760	0.28	+0.5
3,389,403	+		DDA3937_RS14760	0.30	-0.4
3,389,404	-		DDA3937_RS14760	0.30	-0.1
3,389,418	+		DDA3937_RS14760	0.32	-1.6
3,389,557	+		DDA3937_RS14760	0.43	-1.3
3,389,557	+		DDA3937_RS14760	0.43	+0.6
3,389,557	+		DDA3937_RS14760	0.43	-0.0
3,389,558	-		DDA3937_RS14760	0.43	-0.2
3,389,558	-		DDA3937_RS14760	0.43	-0.9
3,389,558	-		DDA3937_RS14760	0.43	-1.2
3,389,558	-		DDA3937_RS14760	0.43	-0.2
3,389,558	-		DDA3937_RS14760	0.43	-0.8
3,389,558	-		DDA3937_RS14760	0.43	-0.0
3,389,558	-		DDA3937_RS14760	0.43	-2.3
3,389,558	-		DDA3937_RS14760	0.43	-0.2
3,389,558	-		DDA3937_RS14760	0.43	-0.7
3,389,561	+		DDA3937_RS14760	0.43	-0.9
3,389,562	-		DDA3937_RS14760	0.43	+0.8
3,389,647	+		DDA3937_RS14760	0.51	-0.2
3,389,648	-		DDA3937_RS14760	0.51	+0.6
3,389,648	-		DDA3937_RS14760	0.51	+0.9
3,389,648	-		DDA3937_RS14760	0.51	+0.6
3,389,649	+		DDA3937_RS14760	0.51	+0.1
3,389,649	+		DDA3937_RS14760	0.51	-0.7
3,389,649	+		DDA3937_RS14760	0.51	-0.4
3,389,649	+		DDA3937_RS14760	0.51	+0.4
3,389,649	+		DDA3937_RS14760	0.51	-2.0
3,389,649	+		DDA3937_RS14760	0.51	+1.2
3,389,650	-		DDA3937_RS14760	0.51	-0.4
3,389,650	-		DDA3937_RS14760	0.51	-1.4
3,389,650	-		DDA3937_RS14760	0.51	-1.2
3,389,650	-		DDA3937_RS14760	0.51	-1.2
3,389,697	+		DDA3937_RS14760	0.55	-0.1
3,389,697	+		DDA3937_RS14760	0.55	-1.0
3,389,698	-		DDA3937_RS14760	0.55	+0.2
3,389,698	-		DDA3937_RS14760	0.55	-1.8
3,389,732	-		DDA3937_RS14760	0.58	-3.0
3,389,735	+		DDA3937_RS14760	0.58	-0.7
3,389,744	+		DDA3937_RS14760	0.59	-0.0
3,389,745	-		DDA3937_RS14760	0.59	-1.8
3,389,804	+		DDA3937_RS14760	0.64	-0.7
3,389,804	+		DDA3937_RS14760	0.64	-1.6
3,389,804	+		DDA3937_RS14760	0.64	-0.4
3,389,805	-		DDA3937_RS14760	0.64	-0.6
3,389,805	-		DDA3937_RS14760	0.64	-0.1
3,389,883	-		DDA3937_RS14760	0.70	+0.1