Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14415

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,303,230	+				+0.2
3,303,231	+				+0.3
3,303,232	-				-0.8
3,303,232	-				-0.8
3,303,398	-		DDA3937_RS14410	0.22	-0.1
3,303,398	-		DDA3937_RS14410	0.22	-0.1
3,303,517	+		DDA3937_RS14410	0.37	+2.2
3,303,517	+		DDA3937_RS14410	0.37	-0.5
3,303,559	-		DDA3937_RS14410	0.43	+0.5
3,303,713	+		DDA3937_RS14410	0.62	-0.2
3,303,713	+		DDA3937_RS14410	0.62	-0.8
3,303,743	+		DDA3937_RS14410	0.66	-0.5
3,303,743	+				+1.2
3,303,743	+		DDA3937_RS14410	0.66	-0.3
3,303,743	+		DDA3937_RS14410	0.66	-1.8
3,303,743	+		DDA3937_RS14410	0.66	-1.1
3,303,743	+		DDA3937_RS14410	0.66	-0.1
3,303,744	-		DDA3937_RS14410	0.66	+0.4
3,303,744	-		DDA3937_RS14410	0.66	+0.4
3,303,744	-		DDA3937_RS14410	0.66	+0.1
3,303,744	-		DDA3937_RS14410	0.66	+0.7
3,303,744	-		DDA3937_RS14410	0.66	+0.0
3,303,761	+				-1.4
3,303,762	-		DDA3937_RS14410	0.69	+0.7
3,303,904	+		DDA3937_RS14410	0.87	+1.2
3,303,904	+		DDA3937_RS14410	0.87	+0.1
3,303,904	+		DDA3937_RS14410	0.87	-0.3
3,303,926	+				-0.2
3,303,968	-				-0.9
3,303,972	-				+0.4
3,303,972	-				-0.9
3,303,972	-				-0.2
3,303,991	+				-0.7
3,303,992	-				-0.8
3,303,994	+				-0.8
3,303,995	-				-0.8
3,303,995	-				+0.3
3,303,995	-				-0.3
3,304,028	-				-0.3
3,304,114	+		DDA3937_RS14415	0.12	+0.6
3,304,114	+		DDA3937_RS14415	0.12	-0.0
3,304,114	+		DDA3937_RS14415	0.12	-0.3
3,304,114	+		DDA3937_RS14415	0.12	-1.0
3,304,115	-		DDA3937_RS14415	0.12	-1.6
3,304,115	-		DDA3937_RS14415	0.12	+0.9
3,304,115	-		DDA3937_RS14415	0.12	+0.1
3,304,115	-		DDA3937_RS14415	0.12	-0.6
3,304,153	+		DDA3937_RS14415	0.18	-0.5
3,304,153	+		DDA3937_RS14415	0.18	-0.1
3,304,153	+		DDA3937_RS14415	0.18	+0.2
3,304,154	-		DDA3937_RS14415	0.18	-0.2
3,304,154	-		DDA3937_RS14415	0.18	-0.3
3,304,255	+		DDA3937_RS14415	0.32	+0.7
3,304,303	+		DDA3937_RS14415	0.39	+0.9
3,304,394	+		DDA3937_RS14415	0.51	+0.3
3,304,394	+		DDA3937_RS14415	0.51	+0.7
3,304,395	-		DDA3937_RS14415	0.51	-1.1
3,304,396	+		DDA3937_RS14415	0.52	-0.2
3,304,396	+		DDA3937_RS14415	0.52	+0.2
3,304,397	-		DDA3937_RS14415	0.52	+0.5
3,304,397	-		DDA3937_RS14415	0.52	+1.5
3,304,407	-		DDA3937_RS14415	0.53	-0.3
3,304,528	+		DDA3937_RS14415	0.70	-1.4
3,304,528	+		DDA3937_RS14415	0.70	+0.2
3,304,528	+		DDA3937_RS14415	0.70	-0.6
3,304,529	-		DDA3937_RS14415	0.70	-0.6
3,304,552	+		DDA3937_RS14415	0.73	-0.3
3,304,552	+				+0.2
3,304,552	+		DDA3937_RS14415	0.73	-1.3
3,304,552	+		DDA3937_RS14415	0.73	-0.2
3,304,552	+		DDA3937_RS14415	0.73	-1.8
3,304,552	+		DDA3937_RS14415	0.73	+0.2
3,304,552	+		DDA3937_RS14415	0.73	+0.2
3,304,553	-				+0.2
3,304,553	-		DDA3937_RS14415	0.74	+1.0
3,304,553	-		DDA3937_RS14415	0.74	+0.7
3,304,553	-		DDA3937_RS14415	0.74	+1.0
3,304,553	-		DDA3937_RS14415	0.74	+3.5
3,304,553	-		DDA3937_RS14415	0.74	+1.2
3,304,553	-		DDA3937_RS14415	0.74	+0.4
3,304,553	-		DDA3937_RS14415	0.74	-1.4
3,304,556	+		DDA3937_RS14415	0.74	+0.7
3,304,556	+		DDA3937_RS14415	0.74	-1.5
3,304,556	+		DDA3937_RS14415	0.74	-0.5
3,304,557	-		DDA3937_RS14415	0.74	-0.1
3,304,557	-		DDA3937_RS14415	0.74	-0.7
3,304,557	-		DDA3937_RS14415	0.74	-2.8
3,304,557	-		DDA3937_RS14415	0.74	-0.1
3,304,557	-		DDA3937_RS14415	0.74	-1.6
3,304,720	+				-0.4
3,304,720	+				+0.6
3,304,720	+				+0.4
3,304,721	-				-0.0
3,304,742	+				-0.8
3,304,742	+				-0.5
3,304,742	+				-0.3
3,304,743	-				-0.2
3,304,812	+		DDA3937_RS14420	0.11	-0.2
3,304,813	-		DDA3937_RS14420	0.11	+0.8
3,304,823	+		DDA3937_RS14420	0.13	-0.8
3,304,823	+		DDA3937_RS14420	0.13	-0.4
3,304,824	-		DDA3937_RS14420	0.13	-0.1
3,304,824	-		DDA3937_RS14420	0.13	+0.2
3,304,824	-		DDA3937_RS14420	0.13	-0.2
3,304,842	+		DDA3937_RS14420	0.16	-0.3
3,304,894	+		DDA3937_RS14420	0.23	-0.6
3,304,894	+		DDA3937_RS14420	0.23	+0.0
3,304,895	-		DDA3937_RS14420	0.23	-0.2
3,305,001	+		DDA3937_RS14420	0.39	-0.2
3,305,001	+		DDA3937_RS14420	0.39	+1.7
3,305,002	-		DDA3937_RS14420	0.39	-0.5
3,305,002	-		DDA3937_RS14420	0.39	+0.3
3,305,105	+		DDA3937_RS14420	0.54	-1.2
3,305,105	+		DDA3937_RS14420	0.54	+0.4
3,305,105	+		DDA3937_RS14420	0.54	-0.6
3,305,106	-		DDA3937_RS14420	0.54	+0.2
3,305,118	+		DDA3937_RS14420	0.56	+0.2
3,305,119	-		DDA3937_RS14420	0.56	+0.7
3,305,119	-		DDA3937_RS14420	0.56	-0.7
3,305,119	-		DDA3937_RS14420	0.56	+0.7
3,305,130	+		DDA3937_RS14420	0.57	-0.2
3,305,130	+		DDA3937_RS14420	0.57	-0.2
3,305,131	-		DDA3937_RS14420	0.57	-2.0
3,305,133	+		DDA3937_RS14420	0.58	-0.2
3,305,133	+		DDA3937_RS14420	0.58	-1.4
3,305,134	-		DDA3937_RS14420	0.58	-0.2
3,305,134	-		DDA3937_RS14420	0.58	-0.5
3,305,270	+		DDA3937_RS14420	0.78	+1.0
3,305,401	+				-0.3
3,305,402	-				-0.5
3,305,402	-				-0.1
3,305,417	+				-1.6
3,305,417	+				+0.1
3,305,425	+				-1.4
3,305,425	+				-0.4
3,305,425	+				+0.0
3,305,425	+				-2.5
3,305,425	+				-0.4
3,305,426	-				+0.0
3,305,426	-				+0.5
3,305,426	-				+1.2
3,305,426	-				+0.9
3,305,426	-				-3.2
3,305,500	+				+0.0
3,305,527	+				-1.6
3,305,527	+				+1.0
3,305,528	-				-0.3
3,305,528	-				-0.7
3,305,528	-				-1.3
3,305,548	+				-0.1
3,305,548	+				-1.0
3,305,548	+				-1.0
3,305,549	-				+0.2
3,305,683	+		DDA3937_RS14425	0.24	+0.0
3,305,683	+		DDA3937_RS14425	0.24	-0.8
3,305,684	-		DDA3937_RS14425	0.24	+0.2