Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13770

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,137,255	-		DDA3937_RS13765	0.59	+0.1
3,137,255	-		DDA3937_RS13765	0.59	-0.8
3,137,301	+		DDA3937_RS13765	0.61	+0.6
3,137,371	+		DDA3937_RS13765	0.65	+1.7
3,137,389	+		DDA3937_RS13765	0.66	+0.1
3,137,389	+		DDA3937_RS13765	0.66	+0.4
3,137,389	+		DDA3937_RS13765	0.66	-0.6
3,137,389	+		DDA3937_RS13765	0.66	+0.5
3,137,389	+		DDA3937_RS13765	0.66	-0.3
3,137,389	+		DDA3937_RS13765	0.66	+0.3
3,137,389	+		DDA3937_RS13765	0.66	-0.3
3,137,389	+		DDA3937_RS13765	0.66	-0.2
3,137,390	-		DDA3937_RS13765	0.66	+0.2
3,137,390	-		DDA3937_RS13765	0.66	+0.1
3,137,390	-		DDA3937_RS13765	0.66	-0.2
3,137,390	-		DDA3937_RS13765	0.66	-0.1
3,137,390	-		DDA3937_RS13765	0.66	+0.3
3,137,390	-		DDA3937_RS13765	0.66	+0.8
3,137,578	+		DDA3937_RS13765	0.76	+0.6
3,137,578	+		DDA3937_RS13765	0.76	-0.1
3,137,618	-		DDA3937_RS13765	0.79	+1.2
3,137,624	+		DDA3937_RS13765	0.79	-0.7
3,138,401	+		DDA3937_RS13770	0.53	+0.2
3,138,401	+				+0.9
3,138,401	+		DDA3937_RS13770	0.53	+0.8
3,138,554	+		DDA3937_RS13770	0.82	+1.0
3,138,831	+				-0.1
3,138,831	+				+0.8
3,138,832	-				+1.3
3,138,832	-				-0.4
3,138,891	-				+0.6
3,138,941	+				+0.9
3,138,941	+				+0.5
3,138,975	+				-0.7
3,138,986	-				+2.5
3,139,028	+				-0.5
3,139,029	-				+0.4
3,139,044	-				-0.6
3,139,044	-				-0.7
3,139,105	+		DDA3937_RS23430	0.16	-0.5
3,139,105	+		DDA3937_RS23430	0.16	+0.1
3,139,105	+		DDA3937_RS23430	0.16	+1.2
3,139,106	-		DDA3937_RS23430	0.16	+0.2
3,139,106	-		DDA3937_RS23430	0.16	-0.6
3,139,120	+		DDA3937_RS23430	0.26	-1.6
3,139,120	+		DDA3937_RS23430	0.26	-0.1
3,139,121	-		DDA3937_RS23430	0.27	+1.0
3,139,121	-		DDA3937_RS23430	0.27	+0.5
3,139,121	-		DDA3937_RS23430	0.27	-0.1
3,139,208	-		DDA3937_RS23430	0.86	-0.0
3,139,226	+				+0.9
3,139,226	+				+0.3
3,139,226	+				+0.3
3,139,226	+				+0.5
3,139,227	-				+0.4
3,139,276	-				-0.1
3,139,276	-				-0.3
3,139,276	-				+1.2
3,139,276	-				-0.8
3,139,313	+				-0.7
3,139,389	-		DDA3937_RS13775	0.24	-0.0
3,139,389	-		DDA3937_RS13775	0.24	-0.5
3,139,442	+		DDA3937_RS13775	0.46	-0.4
3,139,442	+		DDA3937_RS13775	0.46	+0.3
3,139,443	-		DDA3937_RS13775	0.46	-0.6
3,139,443	-		DDA3937_RS13775	0.46	-1.3
3,139,443	-		DDA3937_RS13775	0.46	+0.8
3,139,448	+		DDA3937_RS13775	0.48	+0.0
3,139,449	-		DDA3937_RS13775	0.49	-0.3
3,139,449	-		DDA3937_RS13775	0.49	-0.6
3,139,449	-		DDA3937_RS13775	0.49	-1.6
3,139,449	-		DDA3937_RS13775	0.49	-0.1
3,139,449	-		DDA3937_RS13775	0.49	+0.3
3,139,449	-		DDA3937_RS13775	0.49	-0.2
3,139,449	-		DDA3937_RS13775	0.49	+0.8
3,139,582	-				+0.8
3,139,582	-				+0.3
3,139,582	-				+0.0
3,139,602	+				-1.0
3,139,603	-				-0.1
3,139,610	+				+0.3
3,139,618	-				-0.0
3,139,618	-				-0.1
3,139,620	+				-1.2
3,139,621	-				+0.3
3,139,621	-				+0.1
3,139,626	+				+0.4