Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12010

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,734,033	-				-0.0
2,734,033	-				-0.6
2,734,033	-				-0.5
2,734,033	-				+0.4
2,734,033	-				-0.5
2,734,033	-				-0.5
2,734,041	-				+0.9
2,734,063	+				+0.4
2,734,155	-		DDA3937_RS23215	0.24	-0.1
2,734,171	+		DDA3937_RS23215	0.28	+1.4
2,734,201	+		DDA3937_RS23215	0.34	-0.5
2,734,201	+		DDA3937_RS23215	0.34	-0.1
2,734,203	+		DDA3937_RS23215	0.34	-0.1
2,734,203	+		DDA3937_RS23215	0.34	-0.8
2,734,203	+		DDA3937_RS23215	0.34	+0.8
2,734,203	+		DDA3937_RS23215	0.34	-0.1
2,734,204	-		DDA3937_RS23215	0.35	+0.0
2,734,205	+		DDA3937_RS23215	0.35	-0.3
2,734,205	+		DDA3937_RS23215	0.35	+0.5
2,734,205	+		DDA3937_RS23215	0.35	-0.6
2,734,205	+		DDA3937_RS23215	0.35	-0.7
2,734,205	+		DDA3937_RS23215	0.35	+0.3
2,734,205	+		DDA3937_RS23215	0.35	-1.7
2,734,205	+		DDA3937_RS23215	0.35	+0.3
2,734,205	+		DDA3937_RS23215	0.35	-1.3
2,734,205	+		DDA3937_RS23215	0.35	-0.1
2,734,205	+		DDA3937_RS23215	0.35	-0.4
2,734,383	+		DDA3937_RS23215	0.73	+1.1
2,734,427	+		DDA3937_RS23215	0.82	+0.1
2,734,427	+		DDA3937_RS23215	0.82	-0.1
2,734,428	-		DDA3937_RS23215	0.82	+0.1
2,734,494	-				+0.6
2,734,520	+				-0.1
2,734,521	-				+0.2
2,734,521	-				+0.8
2,734,694	+		DDA3937_RS12010	0.34	-0.1
2,734,695	-		DDA3937_RS12010	0.34	-0.7
2,734,759	+		DDA3937_RS12010	0.46	-0.7
2,734,760	-		DDA3937_RS12010	0.46	-0.8
2,735,010	-				+0.4
2,735,028	-				-0.3
2,735,028	-				-0.4
2,735,160	-				-0.4
2,735,160	-				-1.0
2,735,226	+		DDA3937_RS12015	0.23	-1.1
2,735,267	-		DDA3937_RS12015	0.42	-1.7
2,735,267	-		DDA3937_RS12015	0.42	+0.5
2,735,268	+		DDA3937_RS12015	0.43	+1.7
2,735,269	-		DDA3937_RS12015	0.43	-0.1
2,735,402	+				+0.8
2,735,402	+				-1.1
2,735,693	-				+0.4
2,735,696	+				+0.3
2,735,697	-				-1.7
2,735,766	+				+0.8
2,735,767	-				-0.5
2,735,849	-				-0.7
2,735,854	-				-0.6
2,735,949	+		DDA3937_RS12025	0.11	+1.2
2,735,949	+		DDA3937_RS12025	0.11	-0.3
2,735,950	-		DDA3937_RS12025	0.11	-0.5
2,735,950	-		DDA3937_RS12025	0.11	+1.4
2,736,029	-		DDA3937_RS12025	0.15	+0.2