Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,680,766	-		DDA3937_RS11795	0.64	-0.6
2,680,766	-		DDA3937_RS11795	0.64	-0.1
2,680,766	-		DDA3937_RS11795	0.64	+0.6
2,681,020	-				+0.9
2,681,041	+				-1.1
2,681,041	+				+0.8
2,681,041	+				-0.5
2,681,042	-				+0.2
2,681,042	-				+0.9
2,681,054	-				+0.1
2,681,054	-				+0.1
2,681,054	-				-0.2
2,681,106	+				-1.4
2,681,107	-				-0.1
2,681,107	-				+1.0
2,681,167	+		DDA3937_RS22800	0.12	-0.3
2,681,168	-		DDA3937_RS22800	0.12	+0.5
2,681,241	+		DDA3937_RS22800	0.24	-0.6
2,681,241	+		DDA3937_RS22800	0.24	+0.1
2,681,241	+		DDA3937_RS22800	0.24	-1.1
2,681,242	-		DDA3937_RS22800	0.24	+0.6
2,681,242	-		DDA3937_RS22800	0.24	+0.3
2,681,242	-		DDA3937_RS22800	0.24	-0.9
2,681,331	+		DDA3937_RS22800	0.38	-0.4
2,681,337	+		DDA3937_RS22800	0.39	-0.2
2,681,366	-		DDA3937_RS22800	0.43	+0.1
2,681,366	-		DDA3937_RS22800	0.43	+0.3
2,681,366	-		DDA3937_RS22800	0.43	-0.1
2,681,366	-		DDA3937_RS22800	0.43	-1.4
2,681,366	-		DDA3937_RS22800	0.43	-1.0
2,681,366	-		DDA3937_RS22800	0.43	-1.1
2,681,387	-		DDA3937_RS22800	0.47	+0.7
2,681,398	+		DDA3937_RS22800	0.48	+0.3
2,681,398	+		DDA3937_RS22800	0.48	-0.3
2,681,399	-		DDA3937_RS22800	0.49	+0.2
2,681,399	-		DDA3937_RS22800	0.49	-0.1
2,681,428	+		DDA3937_RS22800	0.53	+0.6
2,681,428	+		DDA3937_RS22800	0.53	+0.8
2,681,451	+		DDA3937_RS22800	0.57	+0.3
2,681,452	-		DDA3937_RS22800	0.57	+0.4
2,681,478	+		DDA3937_RS22800	0.61	-1.7
2,681,529	+				+0.3
2,681,529	+		DDA3937_RS22800	0.69	-1.3
2,681,529	+		DDA3937_RS22800	0.69	+0.3
2,681,530	-		DDA3937_RS22800	0.69	+0.9
2,681,530	-		DDA3937_RS22800	0.69	+0.7
2,681,530	-		DDA3937_RS22800	0.69	-0.1
2,681,604	+		DDA3937_RS22800	0.81	-0.4
2,681,604	+		DDA3937_RS22800	0.81	-0.6
2,681,604	+		DDA3937_RS22800	0.81	-0.3
2,681,604	+		DDA3937_RS22800	0.81	+0.2
2,681,606	+		DDA3937_RS22800	0.81	+0.0
2,681,606	+		DDA3937_RS22800	0.81	+0.0
2,681,606	+		DDA3937_RS22800	0.81	+0.2
2,681,606	+		DDA3937_RS22800	0.81	+0.3
2,681,606	+		DDA3937_RS22800	0.81	+0.5
2,681,606	+		DDA3937_RS22800	0.81	+0.8
2,681,607	-		DDA3937_RS22800	0.81	+0.6
2,681,607	-		DDA3937_RS22800	0.81	+0.2
2,681,714	+				-0.1
2,681,721	+				+0.1
2,681,788	-				-0.9
2,681,845	-				+0.6
2,681,867	-		DDA3937_RS11805	0.11	+0.2
2,681,927	+		DDA3937_RS11805	0.18	+0.1
2,681,955	+		DDA3937_RS11805	0.21	-0.7
2,681,956	-		DDA3937_RS11805	0.21	-0.9
2,681,956	-		DDA3937_RS11805	0.21	+0.3
2,681,956	-		DDA3937_RS11805	0.21	+1.1
2,681,956	-		DDA3937_RS11805	0.21	-0.4
2,681,956	-		DDA3937_RS11805	0.21	-0.0
2,681,956	-		DDA3937_RS11805	0.21	+0.7
2,681,956	-		DDA3937_RS11805	0.21	-0.5
2,681,956	-		DDA3937_RS11805	0.21	-0.2
2,681,956	-		DDA3937_RS11805	0.21	-2.2
2,681,968	+		DDA3937_RS11805	0.22	+0.6
2,681,969	-		DDA3937_RS11805	0.22	+0.5
2,681,969	-		DDA3937_RS11805	0.22	-1.3
2,682,014	+		DDA3937_RS11805	0.27	-0.1
2,682,014	+		DDA3937_RS11805	0.27	-2.2
2,682,014	+		DDA3937_RS11805	0.27	+0.2
2,682,015	-		DDA3937_RS11805	0.27	+0.2
2,682,015	-		DDA3937_RS11805	0.27	-0.2
2,682,110	-		DDA3937_RS11805	0.38	-1.0
2,682,200	-		DDA3937_RS11805	0.47	+0.3
2,682,214	+				+2.3
2,682,214	+		DDA3937_RS11805	0.49	-0.4
2,682,235	-		DDA3937_RS11805	0.51	+0.1
2,682,235	-		DDA3937_RS11805	0.51	-0.6
2,682,235	-		DDA3937_RS11805	0.51	-0.3
2,682,381	+		DDA3937_RS11805	0.67	-2.9
2,682,382	-		DDA3937_RS11805	0.67	+0.3
2,682,382	-		DDA3937_RS11805	0.67	-0.0
2,682,385	-		DDA3937_RS11805	0.68	-0.5
2,682,443	+		DDA3937_RS11805	0.74	-0.9
2,682,455	-		DDA3937_RS11805	0.75	+0.1
2,682,595	-				-1.7
2,682,615	-				-0.5
2,682,615	-				-1.3
2,682,632	-				-0.1
2,682,632	-				-0.2
2,682,661	+				-0.5
2,682,671	+				+0.4
2,682,924	-				+0.5
2,682,940	-				-0.3
2,683,005	+				+0.6
2,683,030	+				-0.1
2,683,032	+				-0.3
2,683,320	+		DDA3937_RS11810	0.25	-0.7
2,683,349	-		DDA3937_RS11810	0.29	+0.1
2,683,520	+		DDA3937_RS11810	0.50	+1.1
2,683,520	+		DDA3937_RS11810	0.50	+0.7
2,683,520	+		DDA3937_RS11810	0.50	-0.4
2,683,520	+		DDA3937_RS11810	0.50	-0.2
2,683,521	-		DDA3937_RS11810	0.50	-0.9
2,683,521	-		DDA3937_RS11810	0.50	+0.5
2,683,521	-		DDA3937_RS11810	0.50	-1.8
2,683,627	-		DDA3937_RS11810	0.63	+0.2