Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11655

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,649,389	-		DDA3937_RS11650	0.57	-0.9
2,649,596	+		DDA3937_RS11650	0.71	+1.2
2,649,630	+		DDA3937_RS11650	0.74	-2.9
2,649,631	-		DDA3937_RS11650	0.74	+1.5
2,649,638	-		DDA3937_RS11650	0.74	-0.0
2,649,638	-		DDA3937_RS11650	0.74	+0.3
2,649,638	-		DDA3937_RS11650	0.74	-0.1
2,649,640	+		DDA3937_RS11650	0.74	-0.1
2,649,640	+		DDA3937_RS11650	0.74	-1.4
2,649,640	+		DDA3937_RS11650	0.74	+0.3
2,649,640	+		DDA3937_RS11650	0.74	-0.0
2,649,648	+		DDA3937_RS11650	0.75	-0.8
2,649,648	+		DDA3937_RS11650	0.75	-0.6
2,649,648	+		DDA3937_RS11650	0.75	+0.2
2,649,648	+		DDA3937_RS11650	0.75	-0.4
2,649,648	+		DDA3937_RS11650	0.75	-0.4
2,649,648	+		DDA3937_RS11650	0.75	+0.3
2,649,648	+		DDA3937_RS11650	0.75	-0.1
2,649,649	-		DDA3937_RS11650	0.75	+0.3
2,649,649	-		DDA3937_RS11650	0.75	-1.2
2,649,649	-		DDA3937_RS11650	0.75	+0.2
2,649,649	-		DDA3937_RS11650	0.75	-0.2
2,649,666	+		DDA3937_RS11650	0.76	-1.3
2,649,666	+		DDA3937_RS11650	0.76	-0.4
2,649,670	+		DDA3937_RS11650	0.76	-0.2
2,649,671	-		DDA3937_RS11650	0.77	-0.2
2,649,671	-		DDA3937_RS11650	0.77	+0.4
2,649,723	+		DDA3937_RS11650	0.80	+0.3
2,649,820	+		DDA3937_RS11650	0.87	-0.2
2,649,821	-		DDA3937_RS11650	0.87	-0.3
2,649,828	+		DDA3937_RS11650	0.87	-2.2
2,649,912	+				+0.2
2,649,914	+				-0.1
2,649,914	+				+0.7
2,649,914	+				+0.1
2,649,915	-				+0.2
2,649,915	-				-0.3
2,649,915	-				-0.1
2,649,915	-				+1.5
2,649,937	-				-0.5
2,649,967	+				+2.1
2,649,968	-				-0.3
2,649,968	-				-0.8
2,650,005	+				-0.9
2,650,007	+				+0.4
2,650,008	-				-1.8
2,650,008	-				-0.1
2,650,009	+				-0.0
2,650,009	+				-0.1
2,650,009	+				-0.6
2,650,009	+				-1.4
2,650,009	+				-0.4
2,650,009	+				-0.5
2,650,009	+				-0.4
2,650,009	+				-0.2
2,650,009	+				-1.7
2,650,009	+				-0.4
2,650,009	+				-0.7
2,650,009	+				-1.4
2,650,009	+				-0.6
2,650,009	+				-0.8
2,650,009	+				+0.9
2,650,009	+				-0.3
2,650,009	+				-0.6
2,650,009	+				+0.3
2,650,009	+				+0.8
2,650,009	+				-0.9
2,650,009	+				-0.1
2,650,009	+				-1.2
2,650,009	+				-2.1
2,650,010	-				-1.1
2,650,010	-				-0.5
2,650,010	-				+0.2
2,650,010	-				-2.1
2,650,010	-				-0.3
2,650,010	-				+0.7
2,650,010	-				+0.1
2,650,010	-				-0.8
2,650,010	-				-0.4
2,650,010	-				+0.7
2,650,029	+				+0.1
2,650,125	-				-0.1
2,650,162	+				+0.7
2,650,201	+				-0.1
2,650,232	+				-1.1
2,650,232	+				-0.2
2,650,232	+				-0.3
2,650,233	-				-1.7
2,650,233	-				-0.1
2,650,233	-				-0.3
2,650,234	+				+0.2
2,650,235	-				+0.6
2,650,235	-				-0.0
2,650,235	-				-0.1
2,650,275	+				-0.1
2,650,275	+				-0.7
2,650,275	+				-0.8
2,650,275	+				-0.8
2,650,276	-				+0.5
2,650,276	-				-2.4
2,650,276	-				+0.1
2,650,276	-				-0.2
2,650,328	+				-0.5
2,650,328	+				+0.1
2,650,329	-				-0.1
2,650,329	-				-0.5
2,650,329	-				-0.3
2,650,340	-		DDA3937_RS11655	0.12	-0.8
2,650,371	+		DDA3937_RS11655	0.17	-2.3
2,650,601	+		DDA3937_RS11655	0.59	-0.7
2,650,662	+		DDA3937_RS11655	0.70	-0.3
2,650,662	+		DDA3937_RS11655	0.70	-1.0
2,650,662	+		DDA3937_RS11655	0.70	+0.9
2,650,663	-		DDA3937_RS11655	0.70	+0.2
2,650,663	-		DDA3937_RS11655	0.70	-1.8
2,650,771	+		DDA3937_RS11655	0.90	-2.1
2,650,983	-				+1.1
2,651,067	-				-0.7
2,651,067	-				-0.8
2,651,074	-				-0.6
2,651,105	-				-1.3
2,651,105	-				+0.4
2,651,105	-				-0.9
2,651,105	-				-0.1
2,651,186	+				-0.0
2,651,489	-		DDA3937_RS11660	0.29	-0.2
2,651,755	-		DDA3937_RS11660	0.52	-0.3
2,651,755	-		DDA3937_RS11660	0.52	-0.2
2,651,757	+		DDA3937_RS11660	0.52	-2.4
2,651,757	+		DDA3937_RS11660	0.52	-0.1
2,651,758	-		DDA3937_RS11660	0.52	+0.1
2,651,758	-		DDA3937_RS11660	0.52	-0.3