Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,583,449	+		DDA3937_RS11370	0.79	-0.3
2,583,571	-				+0.5
2,583,571	-				+0.1
2,583,694	+				+0.0
2,583,694	+				+0.0
2,583,694	+				+0.5
2,583,695	-				+0.4
2,583,697	-				+1.1
2,583,794	-		DDA3937_RS11375	0.11	+0.0
2,583,831	-		DDA3937_RS11375	0.18	+0.9
2,583,831	-		DDA3937_RS11375	0.18	+0.4
2,583,984	+		DDA3937_RS11375	0.44	-0.4
2,583,984	+		DDA3937_RS11375	0.44	-0.7
2,583,984	+		DDA3937_RS11375	0.44	+0.1
2,583,984	+		DDA3937_RS11375	0.44	+0.6
2,583,984	+		DDA3937_RS11375	0.44	+1.7
2,583,985	-		DDA3937_RS11375	0.44	+1.2
2,583,990	-		DDA3937_RS11375	0.45	+0.1
2,584,052	-		DDA3937_RS11375	0.56	+0.9
2,584,052	-		DDA3937_RS11375	0.56	+0.1
2,584,052	-		DDA3937_RS11375	0.56	+0.7
2,584,080	-		DDA3937_RS11375	0.61	-1.1
2,584,207	+		DDA3937_RS11375	0.83	-1.3
2,584,207	+		DDA3937_RS11375	0.83	-0.0
2,584,208	-		DDA3937_RS11375	0.83	-0.9
2,584,295	-				+1.0
2,584,310	+				-1.3
2,584,311	-				+1.4
2,584,347	-				-0.9
2,584,352	+				-0.3
2,584,352	+				-0.4
2,584,353	-				-1.2
2,584,364	-				-1.1
2,584,365	+				+0.3
2,584,377	+				+0.5
2,584,377	+				+0.5
2,584,377	+				-1.9
2,584,377	+				+0.7
2,584,377	+				+0.4
2,584,377	+				-1.1
2,584,377	+				-1.1
2,584,377	+				-0.1
2,584,377	+				-0.7
2,584,377	+				-0.3
2,584,378	-				+0.2
2,584,378	-				-0.4
2,584,378	-				-0.4
2,584,378	-				-0.2
2,584,378	-				-0.1
2,584,378	-				+0.0
2,584,460	+				+0.9
2,584,463	+				+1.5
2,584,463	+				+0.3
2,584,463	+				+0.1
2,584,464	-				-0.1
2,584,464	-				-0.5
2,584,504	+				+0.3
2,584,505	-				+0.5
2,584,515	+				+0.6
2,584,516	-				-0.5
2,584,516	-				+0.6
2,584,580	+				-0.7
2,584,581	-				+0.1
2,584,583	+				-1.1
2,584,584	-		DDA3937_RS11380	0.10	-1.6
2,584,584	-		DDA3937_RS11380	0.10	-0.9
2,584,595	-		DDA3937_RS11380	0.11	-0.1
2,584,595	-		DDA3937_RS11380	0.11	+0.6
2,584,616	+		DDA3937_RS11380	0.12	-0.1
2,584,638	+		DDA3937_RS11380	0.14	+0.1
2,584,639	-		DDA3937_RS11380	0.14	+0.9
2,584,657	+		DDA3937_RS11380	0.15	-1.1
2,584,661	+		DDA3937_RS11380	0.16	-0.0
2,584,661	+		DDA3937_RS11380	0.16	-3.1
2,584,661	+		DDA3937_RS11380	0.16	-0.5
2,584,661	+		DDA3937_RS11380	0.16	+0.9
2,584,662	-				-0.1
2,584,732	-		DDA3937_RS11380	0.21	+0.8
2,584,732	-		DDA3937_RS11380	0.21	-0.2
2,584,773	+		DDA3937_RS11380	0.24	-0.1
2,584,774	-		DDA3937_RS11380	0.24	-1.0
2,584,812	+		DDA3937_RS11380	0.26	-0.3
2,584,887	+		DDA3937_RS11380	0.32	-0.6
2,584,899	+		DDA3937_RS11380	0.33	-0.6
2,584,899	+		DDA3937_RS11380	0.33	-1.5
2,584,899	+		DDA3937_RS11380	0.33	-0.2
2,584,899	+		DDA3937_RS11380	0.33	-0.7
2,584,900	-		DDA3937_RS11380	0.33	-2.3
2,584,900	-		DDA3937_RS11380	0.33	-0.1
2,584,903	+		DDA3937_RS11380	0.33	+1.5
2,584,903	+		DDA3937_RS11380	0.33	-0.5
2,584,903	+		DDA3937_RS11380	0.33	-2.1
2,584,903	+		DDA3937_RS11380	0.33	-0.8
2,584,903	+		DDA3937_RS11380	0.33	+0.4
2,584,903	+		DDA3937_RS11380	0.33	-0.2
2,584,903	+		DDA3937_RS11380	0.33	-0.4
2,584,903	+		DDA3937_RS11380	0.33	-0.9
2,584,904	-				-0.4
2,584,904	-		DDA3937_RS11380	0.33	+0.1
2,584,904	-		DDA3937_RS11380	0.33	-0.5
2,584,904	-		DDA3937_RS11380	0.33	-0.4
2,584,904	-		DDA3937_RS11380	0.33	+1.4
2,584,904	-		DDA3937_RS11380	0.33	-0.1
2,584,904	-		DDA3937_RS11380	0.33	-0.7
2,584,904	-		DDA3937_RS11380	0.33	-1.5
2,585,004	+		DDA3937_RS11380	0.40	-0.6
2,585,199	+		DDA3937_RS11380	0.54	-0.5
2,585,199	+		DDA3937_RS11380	0.54	-0.8
2,585,246	-		DDA3937_RS11380	0.58	+0.3
2,585,391	+		DDA3937_RS11380	0.68	-2.7
2,585,413	-		DDA3937_RS11380	0.70	-0.4
2,585,413	-		DDA3937_RS11380	0.70	-0.2
2,585,640	-		DDA3937_RS11380	0.86	+0.4
2,585,690	-		DDA3937_RS11380	0.90	+1.1
2,585,853	+				+0.5
2,585,854	-				-0.8
2,585,854	-				+0.5
2,585,938	+				-0.3
2,586,001	+		DDA3937_RS11385	0.26	+0.1
2,586,001	+		DDA3937_RS11385	0.26	+0.3
2,586,001	+		DDA3937_RS11385	0.26	+0.5
2,586,001	+				-1.7
2,586,001	+		DDA3937_RS11385	0.26	-0.1
2,586,002	-		DDA3937_RS11385	0.26	-0.1
2,586,004	+		DDA3937_RS11385	0.27	+0.7
2,586,015	-		DDA3937_RS11385	0.30	+0.1
2,586,037	+		DDA3937_RS11385	0.37	-0.9
2,586,037	+		DDA3937_RS11385	0.37	-0.6
2,586,037	+		DDA3937_RS11385	0.37	-0.1
2,586,038	-		DDA3937_RS11385	0.37	-0.8
2,586,038	-		DDA3937_RS11385	0.37	-1.2
2,586,038	-		DDA3937_RS11385	0.37	-0.7
2,586,038	-		DDA3937_RS11385	0.37	-1.0
2,586,038	-		DDA3937_RS11385	0.37	+0.2
2,586,041	+		DDA3937_RS11385	0.38	-0.5
2,586,041	+		DDA3937_RS11385	0.38	-0.1
2,586,041	+		DDA3937_RS11385	0.38	-0.3
2,586,042	-		DDA3937_RS11385	0.38	+0.2
2,586,042	-		DDA3937_RS11385	0.38	-1.1
2,586,042	-		DDA3937_RS11385	0.38	+0.9
2,586,042	-		DDA3937_RS11385	0.38	-0.1
2,586,042	-		DDA3937_RS11385	0.38	-0.0
2,586,042	-				-0.1
2,586,042	-		DDA3937_RS11385	0.38	+0.2
2,586,042	-		DDA3937_RS11385	0.38	+0.5
2,586,042	-		DDA3937_RS11385	0.38	-0.1
2,586,042	-		DDA3937_RS11385	0.38	-0.1
2,586,045	-		DDA3937_RS11385	0.39	+0.2
2,586,045	-		DDA3937_RS11385	0.39	-0.6
2,586,179	-		DDA3937_RS11385	0.80	+0.4
2,586,219	-				-0.6
2,586,219	-				-0.1
2,586,219	-				+0.2
2,586,219	-				+0.3
2,586,219	-				+0.1
2,586,219	-				+0.6
2,586,219	-				+1.9
2,586,222	+				+0.5
2,586,222	+				+0.4
2,586,222	+				+0.2
2,586,222	+				+2.7
2,586,222	+				-0.6
2,586,223	-				+0.1
2,586,223	-				+1.1
2,586,223	-				+1.2
2,586,223	-				-0.9
2,586,223	-				+0.5
2,586,223	-				-2.1
2,586,223	-				-0.8
2,586,275	+				+0.7
2,586,276	-				-0.7
2,586,276	-				-0.3
2,586,281	+				+0.4
2,586,281	+				+0.3
2,586,281	+				+0.7
2,586,281	+				-1.2
2,586,282	-				-0.8
2,586,282	-				-1.3
2,586,282	-				-0.3
2,586,282	-				+0.7
2,586,285	+				-0.1
2,586,333	+				-0.1
2,586,333	+				+0.7
2,586,334	-				+0.0
2,586,362	+				+0.5
2,586,405	-				-0.8
2,586,429	+				-0.2
2,586,434	-				+0.0
2,586,449	+				+0.2