Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11250

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,555,533	+				+0.3
2,555,533	+		DDA3937_RS11240	0.83	+1.6
2,555,534	-		DDA3937_RS11240	0.83	-1.0
2,555,537	+		DDA3937_RS11240	0.83	+0.7
2,555,538	-		DDA3937_RS11240	0.83	+0.7
2,555,538	-		DDA3937_RS11240	0.83	-0.4
2,555,611	+		DDA3937_RS11240	0.87	+0.3
2,555,611	+		DDA3937_RS11240	0.87	+1.0
2,555,611	+		DDA3937_RS11240	0.87	-0.7
2,555,612	-		DDA3937_RS11240	0.87	+0.4
2,555,686	+				+0.1
2,555,687	-				-0.7
2,555,692	+				-0.3
2,556,006	+				-1.0
2,556,006	+				-0.4
2,556,007	-				-0.1
2,556,007	-				-0.7
2,556,007	-				-0.1
2,556,069	+				-0.1
2,556,087	+				+2.1
2,556,121	+		DDA3937_RS11245	0.15	-0.1
2,556,121	+		DDA3937_RS11245	0.15	-0.5
2,556,122	-		DDA3937_RS11245	0.15	-0.7
2,556,136	+		DDA3937_RS11245	0.19	+0.5
2,556,136	+		DDA3937_RS11245	0.19	-0.4
2,556,137	-		DDA3937_RS11245	0.19	-0.9
2,556,137	-		DDA3937_RS11245	0.19	-1.3
2,556,137	-		DDA3937_RS11245	0.19	+0.2
2,556,139	+		DDA3937_RS11245	0.20	-0.3
2,556,436	-				+0.4
2,556,436	-				-0.7
2,556,436	-				+0.4
2,556,457	+				+0.1
2,556,458	-				-0.1
2,556,467	-				+0.3
2,556,597	+		DDA3937_RS11250	0.69	+0.3
2,556,598	-		DDA3937_RS11250	0.69	-0.4
2,556,598	-		DDA3937_RS11250	0.69	-0.4
2,556,598	-		DDA3937_RS11250	0.69	-0.4
2,556,598	-		DDA3937_RS11250	0.69	-0.1
2,556,690	-				-0.5
2,556,718	-				-0.3
2,556,790	+				-0.5
2,556,797	+				+0.2
2,556,817	+				+0.9
2,556,822	+				-1.2
2,556,857	-				-0.2
2,556,866	+				+0.2
2,556,866	+				+1.2
2,556,867	-				+0.3
2,556,929	+				+0.1
2,556,930	-				+0.3
2,556,930	-				+0.2
2,557,010	+		DDA3937_RS11255	0.15	+0.2
2,557,162	+		DDA3937_RS11255	0.26	+0.9
2,557,163	-		DDA3937_RS11255	0.26	-0.8
2,557,211	+		DDA3937_RS11255	0.30	-0.1
2,557,211	+		DDA3937_RS11255	0.30	-0.8
2,557,212	-		DDA3937_RS11255	0.30	+0.4
2,557,212	-		DDA3937_RS11255	0.30	+0.7
2,557,215	+		DDA3937_RS11255	0.30	-2.4
2,557,215	+		DDA3937_RS11255	0.30	-0.6
2,557,215	+		DDA3937_RS11255	0.30	-0.0
2,557,215	+		DDA3937_RS11255	0.30	+0.6
2,557,216	-		DDA3937_RS11255	0.30	-0.6
2,557,216	-		DDA3937_RS11255	0.30	+0.2
2,557,280	+		DDA3937_RS11255	0.35	+0.3
2,557,397	+		DDA3937_RS11255	0.43	+0.3
2,557,407	+		DDA3937_RS11255	0.44	-0.6
2,557,428	+		DDA3937_RS11255	0.46	+0.2