Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,465,960	-				-0.1
2,466,085	+		DDA3937_RS10925	0.29	-0.4
2,466,241	+		DDA3937_RS10925	0.57	-0.3
2,466,241	+		DDA3937_RS10925	0.57	-1.1
2,466,241	+		DDA3937_RS10925	0.57	-1.1
2,466,242	-		DDA3937_RS10925	0.57	-0.4
2,466,242	-		DDA3937_RS10925	0.57	+0.5
2,466,242	-		DDA3937_RS10925	0.57	+1.6
2,466,243	+		DDA3937_RS10925	0.57	+0.9
2,466,243	+		DDA3937_RS10925	0.57	-0.7
2,466,243	+		DDA3937_RS10925	0.57	-0.7
2,466,243	+		DDA3937_RS10925	0.57	-0.4
2,466,244	-		DDA3937_RS10925	0.57	+0.3
2,466,244	-		DDA3937_RS10925	0.57	-0.2
2,466,262	+		DDA3937_RS10925	0.60	+0.1
2,466,268	+		DDA3937_RS10925	0.61	-1.7
2,466,268	+		DDA3937_RS10925	0.61	+0.0
2,466,285	+		DDA3937_RS10925	0.64	+0.1
2,466,286	-		DDA3937_RS10925	0.65	+0.2
2,466,286	-		DDA3937_RS10925	0.65	+0.4
2,466,385	+		DDA3937_RS10925	0.82	+0.4
2,466,386	-		DDA3937_RS10925	0.82	+0.2
2,466,386	-		DDA3937_RS10925	0.82	+0.5
2,466,386	-		DDA3937_RS10925	0.82	-0.6
2,466,386	-				-1.1
2,466,386	-		DDA3937_RS10925	0.82	-0.9
2,466,440	-				-1.1
2,466,470	+				+0.0
2,466,471	-				-0.5
2,466,472	+				+1.2
2,466,473	-				-0.1
2,466,481	+				-0.7
2,466,482	-				+0.3
2,466,482	-				+0.2
2,466,505	+				-0.4
2,466,505	+				-1.4
2,466,505	+				+0.9
2,466,506	-				-0.6
2,466,506	-				-1.0
2,466,506	-				+0.8
2,466,549	+				-0.6
2,466,549	+				+1.6
2,466,549	+				-0.5
2,466,549	+				+0.4
2,466,549	+				-0.8
2,466,549	+				-0.5
2,466,549	+				+0.5
2,466,550	-				-0.4
2,466,550	-				-0.7
2,466,550	-				-0.7
2,466,550	-				+1.3
2,466,550	-				+0.3
2,466,550	-				-0.3
2,466,550	-				+0.3
2,466,550	-				+1.8
2,466,550	-				-1.4
2,466,550	-				-0.4
2,466,550	-				+1.7
2,466,550	-				-1.0
2,466,550	-				+0.5
2,466,550	-				-1.7
2,466,551	+				+0.5
2,466,551	+				-0.8
2,466,552	-				-2.4
2,466,554	-				-0.3
2,466,581	-				+0.9
2,466,699	+				+0.4
2,466,699	+				-0.5
2,466,700	-				-0.4
2,466,700	-				+0.2
2,466,700	-				+1.5
2,466,738	+				-0.5
2,466,739	-				+0.3
2,466,740	+				-0.4
2,466,740	+				+0.9
2,466,740	+				+0.8
2,466,741	-				+0.1
2,466,741	-				+0.6
2,466,741	-				+0.5
2,466,741	-				+0.4
2,466,819	+				+0.4
2,466,831	+				-1.7
2,466,831	+				-0.3
2,466,832	-				-0.6
2,466,832	-				-1.0
2,466,832	-				-0.5
2,466,832	-				+0.4
2,466,834	-				+0.5
2,467,020	+		DDA3937_RS10930	0.14	-1.1
2,467,051	+		DDA3937_RS10930	0.20	-0.9
2,467,052	-		DDA3937_RS10930	0.21	-0.9
2,467,066	+		DDA3937_RS10930	0.23	-0.7
2,467,067	-		DDA3937_RS10930	0.23	+0.3
2,467,067	-		DDA3937_RS10930	0.23	-1.1
2,467,067	-		DDA3937_RS10930	0.23	-1.1
2,467,067	-		DDA3937_RS10930	0.23	-2.1
2,467,085	+		DDA3937_RS10930	0.27	+0.8
2,467,085	+		DDA3937_RS10930	0.27	+0.1
2,467,256	+		DDA3937_RS10930	0.59	+0.5
2,467,256	+		DDA3937_RS10930	0.59	+0.1
2,467,256	+		DDA3937_RS10930	0.59	+0.6
2,467,256	+		DDA3937_RS10930	0.59	+0.4
2,467,257	-		DDA3937_RS10930	0.60	-1.7
2,467,257	-		DDA3937_RS10930	0.60	-2.7
2,467,257	-		DDA3937_RS10930	0.60	-0.6
2,467,296	+		DDA3937_RS10930	0.67	+0.6
2,467,322	+		DDA3937_RS10930	0.72	-0.5
2,467,322	+		DDA3937_RS10930	0.72	+3.0
2,467,322	+		DDA3937_RS10930	0.72	-1.5
2,467,322	+		DDA3937_RS10930	0.72	-1.1
2,467,400	-		DDA3937_RS10930	0.87	+0.3
2,467,404	-		DDA3937_RS10930	0.88	+1.0
2,467,411	+		DDA3937_RS10930	0.89	+0.3
2,467,444	+				+0.5
2,467,467	-				+0.2
2,467,623	+				-0.2
2,467,623	+				-0.4
2,467,624	-				+0.1
2,467,631	+				+0.8
2,467,631	+				-0.5
2,467,646	+				-0.1
2,467,647	-				+0.9
2,467,647	-				-0.8
2,467,665	+				+0.6
2,467,666	-				+0.9
2,467,688	+				+1.1
2,467,688	+				+0.3
2,467,688	+				-0.9
2,467,689	-				+1.6
2,467,689	-				+0.6
2,467,689	-				-0.4
2,467,689	-				+0.0
2,467,689	-				+0.2
2,467,689	-				+1.0
2,467,689	-				-1.0
2,467,691	-				+0.2
2,467,691	-				+0.7
2,467,691	-				+0.5
2,467,722	-				+0.5
2,467,779	+				-2.1
2,467,792	+				-0.9
2,467,879	-				-0.6
2,467,905	+				-0.4
2,467,905	+				-0.7
2,467,933	-				-0.8
2,467,933	-				-2.0
2,468,034	+		DDA3937_RS10940	0.12	-1.2
2,468,034	+		DDA3937_RS10940	0.12	-0.2
2,468,035	-		DDA3937_RS10940	0.12	+0.4
2,468,035	-		DDA3937_RS10940	0.12	-0.9
2,468,051	-		DDA3937_RS10940	0.13	+0.0
2,468,051	-		DDA3937_RS10940	0.13	-0.2
2,468,061	-		DDA3937_RS10940	0.14	-0.1
2,468,242	+		DDA3937_RS10940	0.23	-1.0
2,468,242	+		DDA3937_RS10940	0.23	-0.1
2,468,243	-		DDA3937_RS10940	0.23	+0.1
2,468,306	+		DDA3937_RS10940	0.26	-0.1
2,468,307	-		DDA3937_RS10940	0.26	-1.3
2,468,378	+		DDA3937_RS10940	0.30	-0.1
2,468,378	+		DDA3937_RS10940	0.30	-0.4
2,468,379	-		DDA3937_RS10940	0.30	-0.1
2,468,379	-		DDA3937_RS10940	0.30	-1.4
2,468,395	+		DDA3937_RS10940	0.31	-0.1
2,468,395	+		DDA3937_RS10940	0.31	+0.4
2,468,396	-		DDA3937_RS10940	0.31	-0.2