Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10725

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,412,311	-				-1.2
2,412,334	+				+0.2
2,412,361	-		DDA3937_RS10720	0.13	-1.7
2,412,727	+		DDA3937_RS10720	0.70	-0.3
2,412,728	-		DDA3937_RS10720	0.70	-0.9
2,412,728	-		DDA3937_RS10720	0.70	+0.1
2,412,728	-		DDA3937_RS10720	0.70	-0.3
2,412,731	+		DDA3937_RS10720	0.71	-0.7
2,412,775	-		DDA3937_RS10720	0.78	-0.5
2,412,781	-		DDA3937_RS10720	0.79	+0.6
2,412,819	+		DDA3937_RS10720	0.84	-0.7
2,412,839	+		DDA3937_RS10720	0.88	-0.1
2,412,860	-				-1.0
2,412,884	-				+1.3
2,412,884	-				+0.5
2,412,969	+				+0.6
2,413,034	-				-0.6
2,413,062	-				+0.8
2,413,073	+				-0.6
2,413,113	+				+0.2
2,413,114	-				-1.2
2,413,115	+				-0.1
2,413,116	-				-0.4
2,413,181	-				+0.6
2,413,208	-				-0.5
2,413,210	-				+0.0
2,413,249	+				+0.2
2,413,269	+				+0.2
2,413,306	-				-0.6
2,413,309	+				+0.1
2,413,344	-				-1.5
2,413,846	-		DDA3937_RS10725	0.55	+0.2
2,413,900	+		DDA3937_RS10725	0.61	-0.3
2,413,969	-		DDA3937_RS10725	0.68	-1.3
2,413,970	+		DDA3937_RS10725	0.68	-0.1
2,414,228	-				-0.3
2,414,249	+				-1.1
2,414,277	+				-0.2
2,414,297	+				+0.3
2,414,301	-				-0.7
2,414,341	-				+0.0
2,414,342	+				+0.5
2,414,409	+				-1.2
2,414,411	+				+1.5
2,414,415	+				-0.6
2,414,415	+				-1.1
2,414,467	+				-1.7
2,414,484	+				+0.1
2,414,488	+				-1.1
2,414,488	+				-0.7
2,414,598	+				-0.1
2,414,598	+				+0.7
2,414,598	+				-1.0
2,414,599	-				+0.9
2,414,599	-				-0.3
2,414,665	+				-1.1
2,414,665	+				+2.7
2,414,666	-				-0.1
2,414,666	-				-1.1
2,414,687	+		DDA3937_RS10730	0.10	-0.1
2,414,687	+		DDA3937_RS10730	0.10	-0.5
2,414,688	-		DDA3937_RS10730	0.11	-0.3
2,414,688	-		DDA3937_RS10730	0.11	+1.1
2,414,741	+		DDA3937_RS10730	0.31	+0.3
2,414,741	+		DDA3937_RS10730	0.31	-1.9
2,414,741	+		DDA3937_RS10730	0.31	-0.7
2,414,741	+		DDA3937_RS10730	0.31	+0.6
2,414,742	-		DDA3937_RS10730	0.31	+0.4
2,414,742	-		DDA3937_RS10730	0.31	-0.3
2,414,742	-		DDA3937_RS10730	0.31	-0.1
2,414,742	-		DDA3937_RS10730	0.31	-0.5
2,414,742	-		DDA3937_RS10730	0.31	-0.1
2,414,742	-		DDA3937_RS10730	0.31	-0.4
2,414,742	-		DDA3937_RS10730	0.31	-0.1
2,414,742	-		DDA3937_RS10730	0.31	-0.8
2,414,742	-		DDA3937_RS10730	0.31	-0.7
2,414,742	-		DDA3937_RS10730	0.31	+0.8
2,414,743	+		DDA3937_RS10730	0.32	-0.4
2,414,743	+		DDA3937_RS10730	0.32	-0.7
2,414,743	+		DDA3937_RS10730	0.32	-0.8
2,414,743	+		DDA3937_RS10730	0.32	+0.0
2,414,743	+		DDA3937_RS10730	0.32	-0.6
2,414,743	+		DDA3937_RS10730	0.32	-0.2
2,414,743	+		DDA3937_RS10730	0.32	-0.3
2,414,744	-		DDA3937_RS10730	0.32	-1.1
2,414,744	-		DDA3937_RS10730	0.32	-0.5
2,414,744	-		DDA3937_RS10730	0.32	+0.1
2,414,744	-		DDA3937_RS10730	0.32	-0.1
2,414,744	-		DDA3937_RS10730	0.32	-0.5
2,414,744	-		DDA3937_RS10730	0.32	-0.2
2,414,744	-		DDA3937_RS10730	0.32	-0.4
2,414,744	-		DDA3937_RS10730	0.32	-1.3
2,414,818	+		DDA3937_RS10730	0.61	-0.1
2,414,818	+		DDA3937_RS10730	0.61	-0.2
2,414,818	+		DDA3937_RS10730	0.61	+0.4
2,414,818	+		DDA3937_RS10730	0.61	-0.5
2,414,819	-		DDA3937_RS10730	0.61	-0.5
2,414,819	-		DDA3937_RS10730	0.61	+1.3
2,414,819	-		DDA3937_RS10730	0.61	+0.1
2,414,885	+		DDA3937_RS10730	0.86	-0.5
2,414,886	-		DDA3937_RS10730	0.87	+0.2
2,414,886	-		DDA3937_RS10730	0.87	+0.4
2,415,044	+				-2.1
2,415,044	+				-0.7
2,415,059	-				+0.2
2,415,062	+				+1.3
2,415,062	+				+0.4
2,415,062	+				-1.1
2,415,062	+				-0.9
2,415,062	+				-0.8
2,415,062	+				-0.9
2,415,062	+				-0.6
2,415,062	+				+0.6
2,415,063	-				+0.6
2,415,063	-				-0.2
2,415,063	-				-0.2
2,415,063	-				-0.1
2,415,063	-				+0.2
2,415,063	-				-0.1
2,415,063	-				+0.3
2,415,063	-				-0.1
2,415,063	-				-0.7
2,415,063	-				-1.1
2,415,063	-				+0.3
2,415,063	-				+0.2
2,415,064	+				+0.4
2,415,064	+				+1.9
2,415,065	-				+0.8
2,415,065	-				-1.2
2,415,065	-				+0.1
2,415,070	+				+0.5
2,415,071	-				+0.2
2,415,071	-				+1.5
2,415,071	-				-1.4
2,415,072	+				-1.5
2,415,123	+				+0.2
2,415,123	+				+0.9
2,415,123	+				-0.7
2,415,124	-				-1.4
2,415,124	-				+0.0
2,415,165	-				+0.2
2,415,216	+				+0.5
2,415,216	+				-0.1