Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,405,610	+		DDA3937_RS10680	0.43	+0.1
2,405,635	+		DDA3937_RS10680	0.47	-2.4
2,405,668	+		DDA3937_RS10680	0.52	-0.0
2,405,668	+		DDA3937_RS10680	0.52	+0.5
2,405,668	+		DDA3937_RS10680	0.52	-0.2
2,405,669	-		DDA3937_RS10680	0.52	-0.5
2,405,669	-		DDA3937_RS10680	0.52	+0.1
2,405,669	-		DDA3937_RS10680	0.52	-0.7
2,405,694	-				+1.3
2,405,855	+		DDA3937_RS10680	0.80	-0.3
2,405,855	+		DDA3937_RS10680	0.80	+0.2
2,405,855	+		DDA3937_RS10680	0.80	-0.2
2,405,913	+		DDA3937_RS10680	0.89	-0.8
2,405,914	-		DDA3937_RS10680	0.89	+0.1
2,405,954	+				+0.1
2,405,954	+				+0.1
2,405,955	-				-1.2
2,405,974	+				+0.1
2,405,974	+				+0.3
2,405,987	+				+0.6
2,405,987	+				-0.1
2,405,988	-				+1.7
2,406,036	+				-1.1
2,406,067	-				-0.8
2,406,067	-				-1.7
2,406,259	-				-0.1
2,406,273	+		DDA3937_RS10685	0.14	-0.8
2,406,273	+				-1.7
2,406,273	+		DDA3937_RS10685	0.14	-0.2
2,406,273	+		DDA3937_RS10685	0.14	-0.7
2,406,273	+		DDA3937_RS10685	0.14	-1.4
2,406,274	-				+2.2
2,406,274	-		DDA3937_RS10685	0.15	-0.1
2,406,274	-		DDA3937_RS10685	0.15	+0.2
2,406,274	-		DDA3937_RS10685	0.15	-1.1
2,406,274	-		DDA3937_RS10685	0.15	+0.2
2,406,274	-		DDA3937_RS10685	0.15	-0.2
2,406,274	-		DDA3937_RS10685	0.15	+0.1
2,406,274	-		DDA3937_RS10685	0.15	+1.4
2,406,274	-		DDA3937_RS10685	0.15	-0.1
2,406,275	-		DDA3937_RS10685	0.15	+0.8
2,406,300	-		DDA3937_RS10685	0.24	+0.4
2,406,300	-		DDA3937_RS10685	0.24	-0.2
2,406,300	-		DDA3937_RS10685	0.24	-0.1
2,406,379	-		DDA3937_RS10685	0.51	-0.1
2,406,403	+		DDA3937_RS10685	0.59	+0.2
2,406,477	+		DDA3937_RS10685	0.85	-1.5
2,406,478	-		DDA3937_RS10685	0.85	-0.8
2,406,478	-		DDA3937_RS10685	0.85	-1.4
2,406,478	-				-0.4
2,406,478	-		DDA3937_RS10685	0.85	+0.3
2,406,488	-		DDA3937_RS10685	0.89	-0.2
2,406,505	+				-0.2
2,406,506	-				-0.3
2,406,506	-				+0.3
2,406,506	-				+0.0
2,406,584	-				+0.6
2,406,584	-				+0.1
2,406,585	+				-0.2
2,406,773	+		DDA3937_RS10690	0.49	+0.1
2,406,773	+		DDA3937_RS10690	0.49	-0.1
2,406,774	-		DDA3937_RS10690	0.50	+0.6
2,406,776	+		DDA3937_RS10690	0.50	+1.2
2,406,863	+		DDA3937_RS10690	0.75	-0.2
2,406,864	-		DDA3937_RS10690	0.75	+0.9
2,406,864	-		DDA3937_RS10690	0.75	-0.1
2,406,903	-		DDA3937_RS10690	0.86	+0.0
2,406,930	+				+0.9
2,406,931	-				-1.9
2,406,931	-				-0.1
2,406,931	-				-1.2
2,406,935	+				-0.7
2,406,936	-				-1.0
2,406,981	+				-1.1
2,406,981	+				-0.4
2,406,981	+				-0.1
2,406,981	+				+0.1
2,406,982	-				+0.9
2,406,982	-				-0.1
2,406,982	-				+0.9
2,407,009	+				+0.7
2,407,018	+				-0.6
2,407,018	+				+2.2
2,407,018	+				+0.1
2,407,018	+				+0.3
2,407,019	-				+0.8
2,407,020	+				-1.2
2,407,045	-				+0.2
2,407,045	-				+1.0
2,407,046	+				+0.1
2,407,071	-				+0.9
2,407,103	+				-0.6
2,407,103	+				+0.0
2,407,103	+				+0.2
2,407,103	+				-1.1
2,407,103	+				+0.4
2,407,104	-				-0.2
2,407,104	-				+0.1
2,407,104	-				+0.9
2,407,105	+				-0.5
2,407,106	-				-0.3
2,407,106	-				+0.2
2,407,156	+				-0.3
2,407,157	-				-0.0
2,407,157	-				+0.4
2,407,178	+				-0.2
2,407,244	-				-0.2
2,407,260	+				+0.6
2,407,378	-		DDA3937_RS10695	0.20	-0.4
2,407,416	-		DDA3937_RS10695	0.25	+0.5
2,407,539	+		DDA3937_RS10695	0.41	+1.3
2,407,539	+		DDA3937_RS10695	0.41	-0.3
2,407,540	-		DDA3937_RS10695	0.41	-0.2
2,407,558	-		DDA3937_RS10695	0.44	+1.5
2,407,586	-		DDA3937_RS10695	0.48	+0.9
2,407,588	+		DDA3937_RS10695	0.48	-0.2
2,407,589	-		DDA3937_RS10695	0.48	+0.0
2,407,589	-		DDA3937_RS10695	0.48	-1.4
2,407,594	+		DDA3937_RS10695	0.49	-0.3
2,407,594	+		DDA3937_RS10695	0.49	-0.9
2,407,595	-		DDA3937_RS10695	0.49	-1.2
2,407,658	-		DDA3937_RS10695	0.57	+0.5
2,407,756	+		DDA3937_RS10695	0.70	-1.2
2,407,757	-		DDA3937_RS10695	0.70	+0.4