Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09370

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,111,806	-		DDA3937_RS09365	0.55	-1.0
2,111,806	-		DDA3937_RS09365	0.55	+0.5
2,111,806	-		DDA3937_RS09365	0.55	+0.2
2,111,806	-		DDA3937_RS09365	0.55	+0.1
2,111,837	+		DDA3937_RS09365	0.57	+1.6
2,111,837	+		DDA3937_RS09365	0.57	+1.3
2,111,838	-		DDA3937_RS09365	0.57	+0.2
2,111,838	-		DDA3937_RS09365	0.57	-3.0
2,111,838	-		DDA3937_RS09365	0.57	+0.2
2,111,838	-		DDA3937_RS09365	0.57	-1.6
2,111,919	+		DDA3937_RS09365	0.62	-0.0
2,111,919	+		DDA3937_RS09365	0.62	+0.3
2,111,920	-		DDA3937_RS09365	0.62	-0.4
2,111,928	+		DDA3937_RS09365	0.62	-0.5
2,111,928	+		DDA3937_RS09365	0.62	-2.7
2,111,928	+		DDA3937_RS09365	0.62	-0.3
2,111,958	+		DDA3937_RS09365	0.64	+0.2
2,111,961	+		DDA3937_RS09365	0.64	-0.4
2,111,961	+		DDA3937_RS09365	0.64	-0.3
2,111,962	-		DDA3937_RS09365	0.64	-0.1
2,111,962	-		DDA3937_RS09365	0.64	-0.3
2,111,973	+		DDA3937_RS09365	0.65	-0.4
2,112,097	-		DDA3937_RS09365	0.72	-1.2
2,112,468	+				-0.3
2,112,468	+				+0.2
2,112,469	-				+0.0
2,112,543	+				-2.8
2,112,544	-				+0.0
2,112,654	+				-1.0
2,112,654	+				-0.3
2,112,654	+				+0.2
2,112,654	+				+0.1
2,112,654	+				-0.3
2,112,655	-				+0.1
2,112,655	-				-1.0
2,112,655	-				-1.0
2,112,686	+				+0.2
2,112,855	-		DDA3937_RS09370	0.16	-0.6
2,113,094	-		DDA3937_RS09370	0.51	-0.5
2,113,094	-				+1.0
2,113,123	-		DDA3937_RS09370	0.56	-0.8
2,113,462	+				-0.9
2,113,493	+				+0.4
2,113,494	-				-0.1
2,113,506	+				-1.0
2,113,506	+				-0.2
2,113,507	-				-0.2
2,113,517	-				+1.3
2,113,517	-				-0.0
2,113,611	-				-1.0
2,113,649	-				-0.3
2,113,829	+		DDA3937_RS09375	0.23	-0.4
2,113,829	+		DDA3937_RS09375	0.23	+0.1
2,113,829	+		DDA3937_RS09375	0.23	-0.0
2,113,830	-		DDA3937_RS09375	0.23	+0.2
2,113,830	-		DDA3937_RS09375	0.23	-0.4
2,113,848	+		DDA3937_RS09375	0.24	+0.0
2,113,848	+		DDA3937_RS09375	0.24	+0.5
2,113,848	+		DDA3937_RS09375	0.24	-0.6
2,113,848	+		DDA3937_RS09375	0.24	+0.1
2,113,848	+		DDA3937_RS09375	0.24	-0.0
2,113,848	+		DDA3937_RS09375	0.24	-0.6
2,113,882	+		DDA3937_RS09375	0.27	-1.0
2,113,883	-		DDA3937_RS09375	0.28	+1.1
2,113,966	+		DDA3937_RS09375	0.35	-0.2
2,113,966	+				-0.0
2,113,967	-		DDA3937_RS09375	0.35	-0.3
2,114,059	+		DDA3937_RS09375	0.43	-0.5
2,114,059	+		DDA3937_RS09375	0.43	-0.1
2,114,059	+		DDA3937_RS09375	0.43	-0.4
2,114,060	-		DDA3937_RS09375	0.43	+1.0
2,114,060	-		DDA3937_RS09375	0.43	-1.6
2,114,060	-		DDA3937_RS09375	0.43	-1.3
2,114,060	-		DDA3937_RS09375	0.43	-0.5
2,114,284	-		DDA3937_RS09375	0.62	-1.1
2,114,342	+		DDA3937_RS09375	0.67	-1.0
2,114,392	+		DDA3937_RS09375	0.72	-1.5