Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09320

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,094,963	-		DDA3937_RS09310	0.69	-0.6
2,095,165	+		DDA3937_RS09310	0.87	-0.8
2,095,168	+		DDA3937_RS09310	0.88	+0.0
2,095,233	-				+0.2
2,095,258	+				-0.3
2,095,258	+				-0.8
2,095,259	-				+0.0
2,095,348	+				+0.5
2,095,349	-				+0.2
2,095,353	+				-0.9
2,095,354	-				-0.0
2,095,389	+		DDA3937_RS09315	0.17	-0.9
2,095,389	+		DDA3937_RS09315	0.17	-0.0
2,095,390	-		DDA3937_RS09315	0.18	+0.2
2,095,390	-		DDA3937_RS09315	0.18	-0.5
2,095,398	+		DDA3937_RS09315	0.22	+0.0
2,095,398	+		DDA3937_RS09315	0.22	+1.0
2,095,399	-		DDA3937_RS09315	0.22	-1.2
2,095,399	-		DDA3937_RS09315	0.22	+0.3
2,095,399	-		DDA3937_RS09315	0.22	+0.3
2,095,401	+		DDA3937_RS09315	0.23	+0.5
2,095,452	-		DDA3937_RS09315	0.47	-0.5
2,095,452	-		DDA3937_RS09315	0.47	-0.5
2,095,468	-		DDA3937_RS09315	0.54	-0.0
2,095,484	+		DDA3937_RS09315	0.62	-0.3
2,095,485	-		DDA3937_RS09315	0.62	+0.3
2,095,490	+		DDA3937_RS09315	0.65	-0.3
2,095,491	-		DDA3937_RS09315	0.65	+0.3
2,095,491	-		DDA3937_RS09315	0.65	-0.5
2,095,496	+		DDA3937_RS09315	0.68	+0.2
2,095,496	+		DDA3937_RS09315	0.68	+0.2
2,095,496	+		DDA3937_RS09315	0.68	-0.8
2,095,496	+		DDA3937_RS09315	0.68	+0.0
2,095,496	+		DDA3937_RS09315	0.68	+0.8
2,095,496	+		DDA3937_RS09315	0.68	-0.9
2,095,496	+		DDA3937_RS09315	0.68	+0.5
2,095,497	-		DDA3937_RS09315	0.68	-0.2
2,095,497	-		DDA3937_RS09315	0.68	-0.4
2,095,519	-		DDA3937_RS09315	0.78	+0.4
2,095,523	+		DDA3937_RS09315	0.80	-0.4
2,095,524	-		DDA3937_RS09315	0.81	-0.0
2,095,524	-		DDA3937_RS09315	0.81	-0.8
2,095,548	-				-0.8
2,095,548	-				-0.0
2,095,548	-				+0.1
2,095,585	-				-0.4
2,095,599	-				+0.2
2,095,599	-				+0.1
2,095,610	+				-0.1
2,095,610	+				+0.6
2,095,611	-				+1.1
2,095,611	-				-0.8
2,095,611	-				-0.9
2,095,696	-				+0.3
2,095,696	-				+0.1
2,095,699	-				-0.3
2,095,707	-				+0.7
2,095,782	-				-0.3
2,095,812	+				+0.7
2,095,812	+				+1.3
2,095,958	+				+0.9
2,095,958	+				-0.5
2,095,959	-				+0.2
2,095,961	+				-1.3
2,095,961	+				-0.5
2,095,961	+				+1.2
2,095,961	+				-0.5
2,095,961	+				-0.7
2,095,962	-				+0.3
2,095,962	-				+0.3
2,095,962	-				-0.3
2,096,169	-		DDA3937_RS09320	0.33	-0.2
2,096,342	-		DDA3937_RS09320	0.54	+0.5
2,096,367	+		DDA3937_RS09320	0.57	-0.3
2,096,367	+		DDA3937_RS09320	0.57	-0.5
2,096,367	+		DDA3937_RS09320	0.57	-0.5
2,096,367	+		DDA3937_RS09320	0.57	-1.0
2,096,368	-		DDA3937_RS09320	0.57	-0.8
2,096,368	-		DDA3937_RS09320	0.57	+0.6
2,096,369	+		DDA3937_RS09320	0.57	-1.6
2,096,369	+		DDA3937_RS09320	0.57	+0.8
2,096,369	+		DDA3937_RS09320	0.57	-1.4
2,096,369	+		DDA3937_RS09320	0.57	+0.3
2,096,369	+		DDA3937_RS09320	0.57	-0.0
2,096,370	-		DDA3937_RS09320	0.57	-0.4
2,096,370	-		DDA3937_RS09320	0.57	+0.0
2,096,370	-		DDA3937_RS09320	0.57	+1.5
2,096,420	+		DDA3937_RS09320	0.63	+0.6
2,096,421	-		DDA3937_RS09320	0.63	-0.0
2,096,421	-		DDA3937_RS09320	0.63	-0.4
2,096,448	-		DDA3937_RS09320	0.66	+1.0
2,096,550	+		DDA3937_RS09320	0.79	+1.1
2,096,588	+		DDA3937_RS09320	0.83	-0.6
2,096,588	+		DDA3937_RS09320	0.83	-1.2
2,096,589	-		DDA3937_RS09320	0.83	-0.5
2,096,589	-		DDA3937_RS09320	0.83	-0.0
2,096,793	-				-1.8
2,096,793	-				-0.6
2,096,840	+				-0.0
2,096,840	+				-0.7
2,096,841	-				+0.3
2,097,078	-		DDA3937_RS09325	0.28	-0.0
2,097,078	-		DDA3937_RS09325	0.28	-0.5
2,097,078	-		DDA3937_RS09325	0.28	+1.1
2,097,152	-		DDA3937_RS09325	0.35	+0.5
2,097,152	-		DDA3937_RS09325	0.35	+0.4
2,097,336	-		DDA3937_RS09325	0.51	-0.6
2,097,336	-		DDA3937_RS09325	0.51	-0.8
2,097,469	+		DDA3937_RS09325	0.63	-0.5
2,097,469	+		DDA3937_RS09325	0.63	+0.1
2,097,469	+		DDA3937_RS09325	0.63	-0.1
2,097,470	-		DDA3937_RS09325	0.63	+0.1
2,097,470	-		DDA3937_RS09325	0.63	+0.2
2,097,610	+		DDA3937_RS09325	0.76	-0.0
2,097,610	+		DDA3937_RS09325	0.76	-0.5
2,097,611	-		DDA3937_RS09325	0.76	+0.6
2,097,611	-		DDA3937_RS09325	0.76	-0.4