Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,933,974	+				-0.6
1,933,974	+				-0.1
1,933,974	+				-1.2
1,933,974	+				+0.8
1,933,974	+				-0.3
1,933,974	+				-0.1
1,933,974	+				+0.4
1,933,974	+				-0.0
1,933,975	-				-0.8
1,933,975	-				+0.2
1,933,975	-				-0.8
1,933,975	-				-0.3
1,933,975	-				+0.0
1,933,975	-				+0.2
1,933,975	-				-0.2
1,933,975	-				-0.4
1,934,009	+				-0.4
1,934,009	+				+0.0
1,934,060	+		DDA3937_RS08550	0.14	-0.2
1,934,061	-		DDA3937_RS08550	0.14	+0.5
1,934,143	-		DDA3937_RS08550	0.22	+1.1
1,934,273	+		DDA3937_RS08550	0.35	+1.1
1,934,273	+		DDA3937_RS08550	0.35	-0.8
1,934,273	+		DDA3937_RS08550	0.35	-1.0
1,934,274	-		DDA3937_RS08550	0.35	+0.0
1,934,274	-		DDA3937_RS08550	0.35	-1.6
1,934,427	+		DDA3937_RS08550	0.51	+0.2
1,934,427	+		DDA3937_RS08550	0.51	-2.2
1,934,427	+		DDA3937_RS08550	0.51	+1.7
1,934,427	+		DDA3937_RS08550	0.51	-1.0
1,934,428	-		DDA3937_RS08550	0.51	-1.0
1,934,444	+		DDA3937_RS08550	0.52	-0.6
1,934,444	+		DDA3937_RS08550	0.52	-0.8
1,934,445	-		DDA3937_RS08550	0.52	+0.3
1,934,445	-		DDA3937_RS08550	0.52	-0.6
1,934,453	+		DDA3937_RS08550	0.53	-0.3
1,934,453	+		DDA3937_RS08550	0.53	-0.9
1,934,453	+		DDA3937_RS08550	0.53	-0.2
1,934,685	+		DDA3937_RS08550	0.76	-0.3
1,934,685	+		DDA3937_RS08550	0.76	+1.2
1,934,862	+				-0.2
1,934,862	+				-0.8
1,934,862	+				+0.4
1,934,864	+				-0.5
1,934,864	+				+0.0
1,934,864	+				-0.2
1,934,864	+				-0.3
1,934,864	+				-0.1
1,934,865	-				-0.5
1,934,865	-				-0.7
1,934,865	-				+0.0
1,934,865	-				-1.0
1,934,865	-				+0.4
1,934,865	-				-0.6
1,934,877	+				-0.1
1,934,877	+				+0.5
1,934,877	+				+0.4
1,934,877	+				-0.6
1,934,878	-				-0.5
1,934,878	-				+0.4
1,934,878	-				-0.3
1,934,880	+				-0.2
1,934,880	+				+0.5
1,934,917	-				-1.0
1,934,953	+				+0.5
1,934,967	+				+1.4
1,934,968	-				+0.2
1,935,018	+		DDA3937_RS08555	0.31	-0.2
1,935,018	+		DDA3937_RS08555	0.31	-1.6
1,935,136	+				+0.3
1,935,186	+				+0.1
1,935,187	-				-0.1
1,935,226	+				-2.1
1,935,226	+				-0.3
1,935,226	+				+0.7
1,935,247	+				-0.1
1,935,259	+				-1.6
1,935,259	+				+0.3
1,935,260	-				-0.2
1,935,313	-				+1.0
1,935,313	-				-0.3
1,935,383	-				-1.2
1,935,460	-				+2.4
1,935,482	-				+0.2
1,935,482	-				-1.2
1,935,523	+				-0.4
1,935,524	-				-1.3
1,935,560	+				-1.2
1,935,560	+				-0.6
1,935,560	+				+1.2
1,935,561	-				-0.2
1,935,561	-				+2.4
1,935,600	+				+1.0
1,935,604	-				-0.4
1,935,604	-				-0.5
1,935,633	-				-2.3
1,935,645	-				-1.8
1,935,648	+				+0.3
1,935,648	+				+2.0
1,935,648	+				-0.5
1,935,648	+				-0.6
1,935,648	+				-0.0
1,935,648	+				-0.4
1,935,648	+				-1.4
1,935,648	+				+0.1
1,935,648	+				+0.3
1,935,649	-				+0.2
1,935,649	-				-1.1
1,935,649	-				-0.7
1,935,649	-				-0.8
1,935,649	-				-0.4
1,935,649	-				-0.5
1,935,649	-				-0.7
1,935,649	-				+0.2
1,935,649	-				+0.4
1,936,046	+		DDA3937_RS08565	0.49	-0.6