Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,925,230	+		DDA3937_RS08515	0.12	+0.4
1,925,230	+		DDA3937_RS08515	0.12	+0.0
1,925,230	+		DDA3937_RS08515	0.12	+0.2
1,925,231	-		DDA3937_RS08515	0.13	+0.9
1,925,322	-		DDA3937_RS08515	0.20	-1.2
1,925,322	-		DDA3937_RS08515	0.20	+0.4
1,925,331	+		DDA3937_RS08515	0.21	+0.4
1,925,332	-		DDA3937_RS08515	0.21	+1.2
1,925,460	+				+1.0
1,925,525	+		DDA3937_RS08515	0.38	-0.5
1,925,541	+		DDA3937_RS08515	0.39	+1.2
1,925,542	-		DDA3937_RS08515	0.39	-0.8
1,925,781	+		DDA3937_RS08515	0.60	+0.8
1,925,781	+		DDA3937_RS08515	0.60	+0.5
1,925,845	+				+0.3
1,925,845	+		DDA3937_RS08515	0.66	-0.5
1,925,845	+		DDA3937_RS08515	0.66	+0.1
1,925,846	-		DDA3937_RS08515	0.66	-0.6
1,925,846	-		DDA3937_RS08515	0.66	+0.0
1,925,875	+		DDA3937_RS08515	0.68	-0.1
1,925,876	-		DDA3937_RS08515	0.68	-0.1
1,926,172	-				-0.4
1,926,226	+				-1.3
1,926,226	+				+1.6
1,926,226	+				+0.4
1,926,226	+				+0.6
1,926,227	-				-0.6
1,926,227	-				-0.5
1,926,227	-				-1.3
1,926,311	+		DDA3937_RS08520	0.11	+0.6
1,926,311	+		DDA3937_RS08520	0.11	+1.6
1,926,311	+		DDA3937_RS08520	0.11	+0.3
1,926,311	+		DDA3937_RS08520	0.11	+0.2
1,926,312	-		DDA3937_RS08520	0.11	-0.2
1,926,312	-		DDA3937_RS08520	0.11	-0.9
1,926,312	-		DDA3937_RS08520	0.11	-0.7
1,926,522	+		DDA3937_RS08520	0.38	+0.9
1,926,522	+		DDA3937_RS08520	0.38	-1.2
1,926,522	+		DDA3937_RS08520	0.38	+0.4
1,926,522	+		DDA3937_RS08520	0.38	-0.8
1,926,523	-		DDA3937_RS08520	0.38	+0.8
1,926,523	-		DDA3937_RS08520	0.38	-0.1
1,926,523	-		DDA3937_RS08520	0.38	+0.3
1,926,523	-		DDA3937_RS08520	0.38	+0.5
1,926,523	-		DDA3937_RS08520	0.38	-0.4
1,926,523	-		DDA3937_RS08520	0.38	+1.0
1,926,523	-		DDA3937_RS08520	0.38	+0.6
1,926,748	+		DDA3937_RS08520	0.67	+0.4
1,926,749	-		DDA3937_RS08520	0.67	-0.1
1,926,821	+		DDA3937_RS08520	0.76	-0.3
1,926,821	+		DDA3937_RS08520	0.76	-0.7
1,926,822	-		DDA3937_RS08520	0.76	+1.6
1,926,941	+				+0.0
1,926,941	+				+0.4
1,926,941	+				-0.5
1,926,942	-				-1.3
1,926,974	+				+0.8
1,926,975	-				-1.7
1,926,975	-				+0.0
1,926,975	-				+0.3
1,927,206	+		DDA3937_RS08525	0.30	-0.8
1,927,207	-		DDA3937_RS08525	0.30	-0.2
1,927,253	+		DDA3937_RS08525	0.37	-1.0
1,927,253	+		DDA3937_RS08525	0.37	-0.4
1,927,253	+		DDA3937_RS08525	0.37	-2.3
1,927,254	-		DDA3937_RS08525	0.37	-0.2
1,927,254	-		DDA3937_RS08525	0.37	-0.3
1,927,389	-		DDA3937_RS08525	0.57	-0.7
1,927,564	-		DDA3937_RS08525	0.83	-3.6
1,927,564	-		DDA3937_RS08525	0.83	+0.2
1,927,564	-		DDA3937_RS08525	0.83	-1.0
1,927,564	-		DDA3937_RS08525	0.83	-0.4
1,927,618	-				+0.3
1,927,621	+				+1.1
1,927,621	+				+0.6
1,927,654	-				+0.5
1,927,657	+				-0.3
1,927,657	+				-0.1
1,927,693	+				+0.3
1,927,803	+				-0.5
1,927,914	+				+0.3
1,927,917	+				+0.1
1,927,918	-				+0.7
1,927,964	+				+0.8
1,927,975	-				-0.6
1,927,975	-				+0.5
1,927,977	+				+0.2