Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,683,921	+		DDA3937_RS07460	0.35	+1.0
1,683,921	+		DDA3937_RS07460	0.35	-1.2
1,683,921	+		DDA3937_RS07460	0.35	-1.0
1,683,945	+		DDA3937_RS07460	0.37	+0.1
1,683,945	+		DDA3937_RS07460	0.37	-0.1
1,683,981	+		DDA3937_RS07460	0.40	-2.2
1,683,981	+				-0.9
1,683,981	+		DDA3937_RS07460	0.40	-1.1
1,683,981	+		DDA3937_RS07460	0.40	+0.2
1,683,981	+		DDA3937_RS07460	0.40	+0.3
1,683,982	-		DDA3937_RS07460	0.40	+0.3
1,683,996	+		DDA3937_RS07460	0.41	-0.3
1,683,997	-		DDA3937_RS07460	0.41	-1.0
1,683,997	-		DDA3937_RS07460	0.41	-0.9
1,683,997	-		DDA3937_RS07460	0.41	-1.1
1,684,006	+		DDA3937_RS07460	0.41	-0.1
1,684,084	+		DDA3937_RS07460	0.47	+0.1
1,684,085	-		DDA3937_RS07460	0.47	+0.6
1,684,085	-		DDA3937_RS07460	0.47	-0.6
1,684,086	+		DDA3937_RS07460	0.47	+1.5
1,684,087	-		DDA3937_RS07460	0.47	-0.1
1,684,087	-		DDA3937_RS07460	0.47	-0.2
1,684,240	+		DDA3937_RS07460	0.58	+0.6
1,684,241	-		DDA3937_RS07460	0.58	-0.9
1,684,311	+		DDA3937_RS07460	0.63	-0.0
1,684,312	-		DDA3937_RS07460	0.63	-0.8
1,684,312	-		DDA3937_RS07460	0.63	+0.1
1,684,312	-		DDA3937_RS07460	0.63	+1.0
1,684,387	-		DDA3937_RS07460	0.68	-1.7
1,684,487	+		DDA3937_RS07460	0.75	-0.3
1,684,487	+		DDA3937_RS07460	0.75	+0.1
1,684,488	-		DDA3937_RS07460	0.75	-0.2
1,684,488	-		DDA3937_RS07460	0.75	+0.8
1,684,488	-		DDA3937_RS07460	0.75	+0.2
1,684,503	+		DDA3937_RS07460	0.76	-0.5
1,684,503	+		DDA3937_RS07460	0.76	+0.1
1,684,504	-		DDA3937_RS07460	0.76	-0.1
1,684,504	-		DDA3937_RS07460	0.76	-0.4
1,684,504	-		DDA3937_RS07460	0.76	+0.3
1,684,504	-		DDA3937_RS07460	0.76	-0.0
1,684,504	-		DDA3937_RS07460	0.76	-0.6
1,684,506	+		DDA3937_RS07460	0.76	+0.5
1,684,555	-		DDA3937_RS07460	0.80	+0.3
1,684,567	-		DDA3937_RS07460	0.80	+0.2
1,684,567	-		DDA3937_RS07460	0.80	-0.9
1,684,567	-		DDA3937_RS07460	0.80	-0.2
1,684,622	-		DDA3937_RS07460	0.84	-0.3
1,684,666	-		DDA3937_RS07460	0.87	-0.4
1,684,794	-				+0.1
1,684,840	+				+0.3
1,684,840	+				-0.6
1,684,840	+				-0.7
1,684,841	-				+1.1
1,684,841	-				+0.4
1,684,841	-				-0.1
1,684,867	+				-0.2
1,684,867	+				-0.7
1,684,868	-				-0.2
1,684,869	+				+0.3
1,684,870	-				-0.3
1,684,870	-				+0.5
1,684,870	-				+0.3
1,684,870	-				-0.5
1,684,883	-				+0.1
1,685,158	+		DDA3937_RS07465	0.31	-0.7
1,685,488	+		DDA3937_RS07465	0.66	-1.8
1,685,488	+		DDA3937_RS07465	0.66	-0.1
1,685,489	-				+1.1
1,685,489	-		DDA3937_RS07465	0.66	-0.1
1,685,489	-		DDA3937_RS07465	0.66	-0.9
1,685,489	-		DDA3937_RS07465	0.66	+0.1
1,685,489	-		DDA3937_RS07465	0.66	-1.9
1,685,665	+		DDA3937_RS07465	0.84	-3.6
1,685,666	-				+1.7
1,685,806	+				-0.4
1,685,806	+				-0.0
1,685,806	+				+1.5
1,685,807	-				+0.4
1,685,828	-				-0.4
1,685,872	+				-0.1
1,685,872	+				+0.9
1,685,872	+				+0.0
1,685,873	-				-0.6
1,685,873	-				-0.4
1,685,873	-				+0.1
1,685,873	-				-1.1
1,685,882	-				-0.5
1,686,062	-		DDA3937_RS07470	0.12	+0.2
1,686,199	+		DDA3937_RS07470	0.18	-0.2
1,686,254	+		DDA3937_RS07470	0.21	+0.3
1,686,254	+		DDA3937_RS07470	0.21	+0.3
1,686,411	+		DDA3937_RS07470	0.29	-1.3
1,686,496	+		DDA3937_RS07470	0.33	-0.5
1,686,497	-		DDA3937_RS07470	0.33	-0.8
1,686,616	+		DDA3937_RS07470	0.39	-0.1
1,686,616	+		DDA3937_RS07470	0.39	-1.1
1,686,616	+		DDA3937_RS07470	0.39	-2.2
1,686,616	+		DDA3937_RS07470	0.39	+0.1
1,686,617	-		DDA3937_RS07470	0.39	+0.1
1,686,617	-		DDA3937_RS07470	0.39	-1.2
1,686,621	-		DDA3937_RS07470	0.39	-1.7
1,686,621	-		DDA3937_RS07470	0.39	-0.9
1,686,671	+		DDA3937_RS07470	0.41	-0.4