Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,593,802	+		DDA3937_RS07085	0.47	-0.2
1,593,802	+		DDA3937_RS07085	0.47	+0.0
1,593,803	-		DDA3937_RS07085	0.47	-0.6
1,593,843	+		DDA3937_RS07085	0.50	+0.3
1,594,142	+		DDA3937_RS07085	0.71	+0.1
1,594,142	+		DDA3937_RS07085	0.71	+0.1
1,594,142	+		DDA3937_RS07085	0.71	-0.9
1,594,143	-		DDA3937_RS07085	0.71	-0.5
1,594,143	-		DDA3937_RS07085	0.71	+0.1
1,594,143	-		DDA3937_RS07085	0.71	-2.9
1,594,143	-		DDA3937_RS07085	0.71	+0.3
1,594,190	+		DDA3937_RS07085	0.74	+0.7
1,594,224	+		DDA3937_RS07085	0.76	-0.7
1,594,368	-		DDA3937_RS07085	0.86	+0.5
1,594,368	-		DDA3937_RS07085	0.86	-0.2
1,594,368	-		DDA3937_RS07085	0.86	-0.9
1,594,385	+		DDA3937_RS07085	0.87	-0.1
1,594,386	-		DDA3937_RS07085	0.88	-0.0
1,594,386	-		DDA3937_RS07085	0.88	-0.2
1,594,523	-				-0.1
1,594,533	-				+0.2
1,594,562	+				+0.2
1,594,563	-				+0.8
1,594,563	-				+0.4
1,594,584	+				-0.7
1,594,671	+				+0.4
1,594,671	+				+0.7
1,594,672	-				-0.1
1,594,672	-				-0.2
1,595,081	+		DDA3937_RS07090	0.33	+0.5
1,595,115	-		DDA3937_RS07090	0.35	-0.1
1,595,115	-		DDA3937_RS07090	0.35	+1.0
1,595,196	-		DDA3937_RS07090	0.41	+0.4
1,595,213	+		DDA3937_RS07090	0.42	+0.1
1,595,214	-		DDA3937_RS07090	0.42	+0.4
1,595,304	+		DDA3937_RS07090	0.49	+1.7
1,595,305	-		DDA3937_RS07090	0.49	-1.1
1,595,405	+		DDA3937_RS07090	0.56	-0.1
1,595,453	+		DDA3937_RS07090	0.60	+0.6
1,595,498	+		DDA3937_RS07090	0.63	+0.1
1,595,499	-		DDA3937_RS07090	0.63	-0.9
1,595,543	+		DDA3937_RS07090	0.66	+1.1
1,595,544	-		DDA3937_RS07090	0.67	-0.3
1,595,544	-		DDA3937_RS07090	0.67	+0.3
1,595,544	-		DDA3937_RS07090	0.67	+1.6
1,595,544	-		DDA3937_RS07090	0.67	+0.6
1,595,544	-		DDA3937_RS07090	0.67	+0.3
1,595,544	-		DDA3937_RS07090	0.67	+0.2
1,595,687	+		DDA3937_RS07090	0.77	-0.7
1,595,729	+		DDA3937_RS07090	0.80	+0.4
1,595,729	+		DDA3937_RS07090	0.80	+0.5
1,595,729	+		DDA3937_RS07090	0.80	+0.6
1,595,790	-		DDA3937_RS07090	0.85	-0.9
1,595,790	-		DDA3937_RS07090	0.85	+0.9
1,595,839	+		DDA3937_RS07090	0.88	-0.3
1,595,839	+		DDA3937_RS07090	0.88	+2.1
1,595,840	-		DDA3937_RS07090	0.88	-0.2
1,595,859	-				+0.7
1,595,963	-				-0.7
1,596,011	+				+0.0
1,596,012	-				-1.3
1,596,039	+				+0.5
1,596,039	+				+0.4
1,596,040	-				+0.6
1,596,116	+				-1.0
1,596,116	+				+0.1
1,596,116	+				-0.0
1,596,116	+				+0.0
1,596,116	+				-0.6
1,596,116	+				+0.9
1,596,117	-				+0.5
1,596,117	-				-0.5
1,596,117	-				+0.6
1,596,238	-		DDA3937_RS07095	0.23	+0.4
1,596,238	-		DDA3937_RS07095	0.23	-0.9
1,596,240	+		DDA3937_RS07095	0.23	-1.7
1,596,240	+		DDA3937_RS07095	0.23	-0.2
1,596,240	+		DDA3937_RS07095	0.23	-0.5
1,596,241	-		DDA3937_RS07095	0.23	-0.1
1,596,330	+		DDA3937_RS07095	0.33	+0.2
1,596,330	+		DDA3937_RS07095	0.33	+0.5
1,596,330	+		DDA3937_RS07095	0.33	+0.5
1,596,331	-		DDA3937_RS07095	0.33	-0.1
1,596,507	+		DDA3937_RS07095	0.52	-1.9
1,596,508	-		DDA3937_RS07095	0.52	-1.1
1,596,510	+		DDA3937_RS07095	0.52	+0.4
1,596,510	+		DDA3937_RS07095	0.52	-0.4
1,596,511	-		DDA3937_RS07095	0.52	-0.8
1,596,511	-		DDA3937_RS07095	0.52	+0.5
1,596,569	+		DDA3937_RS07095	0.58	-0.2
1,596,606	+		DDA3937_RS07095	0.62	-0.3
1,596,606	+		DDA3937_RS07095	0.62	-0.4
1,596,693	+		DDA3937_RS07095	0.72	+0.5
1,596,693	+		DDA3937_RS07095	0.72	-0.0
1,596,693	+		DDA3937_RS07095	0.72	-0.1
1,596,693	+		DDA3937_RS07095	0.72	+0.1
1,596,693	+		DDA3937_RS07095	0.72	-2.7
1,596,693	+		DDA3937_RS07095	0.72	-0.1
1,596,693	+		DDA3937_RS07095	0.72	-0.7
1,596,693	+		DDA3937_RS07095	0.72	+0.4
1,596,694	-		DDA3937_RS07095	0.72	+1.1
1,596,694	-		DDA3937_RS07095	0.72	+0.9
1,596,694	-		DDA3937_RS07095	0.72	-0.5
1,596,696	-		DDA3937_RS07095	0.72	-0.1
1,596,696	-		DDA3937_RS07095	0.72	+0.0
1,596,812	-		DDA3937_RS07095	0.84	-1.9
1,596,812	-		DDA3937_RS07095	0.84	+0.3
1,596,876	+				+0.3
1,596,878	+				+0.6
1,596,878	+				-0.2
1,596,879	-				+0.3
1,596,954	+				-0.5
1,596,954	+				-0.5
1,596,954	+				-0.2
1,596,978	+				+0.1
1,596,984	-				+0.6
1,596,984	-				+0.4