Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,435,821	+				-1.8
1,435,849	-				+0.5
1,435,849	-				-0.6
1,435,849	-				-0.3
1,435,849	-				-0.6
1,435,849	-				-0.0
1,435,904	+				-0.7
1,435,920	-				-1.6
1,435,992	+		DDA3937_RS06430	0.18	-1.3
1,435,993	-		DDA3937_RS06430	0.18	-0.5
1,436,047	+		DDA3937_RS06430	0.25	-1.2
1,436,047	+		DDA3937_RS06430	0.25	+0.4
1,436,047	+		DDA3937_RS06430	0.25	-0.0
1,436,047	+		DDA3937_RS06430	0.25	-2.1
1,436,048	-		DDA3937_RS06430	0.25	-0.1
1,436,048	-		DDA3937_RS06430	0.25	-0.3
1,436,048	-		DDA3937_RS06430	0.25	+0.2
1,436,048	-		DDA3937_RS06430	0.25	+1.3
1,436,048	-		DDA3937_RS06430	0.25	+0.2
1,436,048	-				+1.8
1,436,048	-		DDA3937_RS06430	0.25	-0.8
1,436,055	+		DDA3937_RS06430	0.26	-0.7
1,436,056	-		DDA3937_RS06430	0.26	-0.0
1,436,065	+		DDA3937_RS06430	0.27	-0.8
1,436,082	-		DDA3937_RS06430	0.29	+1.2
1,436,126	+		DDA3937_RS06430	0.35	+0.3
1,436,126	+		DDA3937_RS06430	0.35	+0.3
1,436,126	+		DDA3937_RS06430	0.35	-0.3
1,436,127	-		DDA3937_RS06430	0.35	-0.1
1,436,127	-		DDA3937_RS06430	0.35	+0.1
1,436,139	+		DDA3937_RS06430	0.36	+0.0
1,436,156	-		DDA3937_RS06430	0.39	-1.4
1,436,156	-		DDA3937_RS06430	0.39	-0.2
1,436,175	+		DDA3937_RS06430	0.41	-1.5
1,436,175	+		DDA3937_RS06430	0.41	+0.8
1,436,176	-		DDA3937_RS06430	0.41	+1.5
1,436,310	+		DDA3937_RS06430	0.58	+0.6
1,436,353	+		DDA3937_RS06430	0.63	+0.8
1,436,353	+		DDA3937_RS06430	0.63	+0.2
1,436,439	-		DDA3937_RS06430	0.74	+1.2
1,436,439	-		DDA3937_RS06430	0.74	+0.5
1,436,473	+		DDA3937_RS06430	0.79	-1.1
1,436,522	+		DDA3937_RS06430	0.85	-1.2
1,436,523	-		DDA3937_RS06430	0.85	+0.9
1,436,523	-		DDA3937_RS06430	0.85	-0.7
1,436,580	+				-0.3
1,436,581	-				-0.8
1,436,581	-				-0.3
1,436,615	-				+0.2
1,436,615	-				+0.7
1,436,641	+				+0.1
1,436,642	-				-1.4
1,436,642	-				+1.5
1,437,211	-		DDA3937_RS06435	0.36	+0.5
1,437,405	-		DDA3937_RS06435	0.51	+0.2
1,438,117	-				-0.8
1,438,117	-				-0.1
1,438,117	-				+1.0
1,438,229	-				-2.1
1,438,255	-				-0.6
1,438,257	+				-0.7
1,438,295	-				-0.8
1,438,295	-				+0.6
1,438,336	-				+0.0
1,438,362	-				-0.2
1,438,362	-				-2.0
1,438,404	-				+1.8
1,438,413	+				+0.6
1,438,414	-				-1.1
1,438,414	-				-0.6
1,438,436	-				+0.1
1,438,472	+				+1.2
1,438,472	+				+0.9
1,438,473	-				+1.1
1,438,473	-				-0.7
1,438,483	+				+0.4
1,438,483	+				+0.2
1,438,483	+				+0.1
1,438,483	+				+0.4
1,438,483	+				-0.2
1,438,483	+				-0.0
1,438,484	-				+0.6
1,438,484	-				+0.2
1,438,484	-				+0.3
1,438,486	+				+0.4
1,438,487	-				+0.9
1,438,503	+				+0.9
1,438,503	+				+0.4
1,438,503	+				+0.8
1,438,503	+				+0.8
1,438,503	+				+0.7
1,438,503	+				+0.5
1,438,504	-				+0.6
1,438,504	-				+1.9
1,438,504	-				+0.5
1,438,504	-				+0.2
1,438,504	-				-0.4
1,438,504	-				+0.5
1,438,505	+				+0.6
1,438,528	-				+2.0
1,438,538	-				+0.3
1,438,538	-				-1.1
1,438,581	+				+0.5
1,438,760	+		DDA3937_RS06440	0.21	+1.2
1,438,761	-		DDA3937_RS06440	0.21	+0.3
1,438,761	-		DDA3937_RS06440	0.21	+0.9
1,438,787	+		DDA3937_RS06440	0.27	+0.1
1,438,787	+		DDA3937_RS06440	0.27	+0.2
1,438,787	+		DDA3937_RS06440	0.27	+0.7
1,438,788	-		DDA3937_RS06440	0.28	-0.5
1,438,788	-		DDA3937_RS06440	0.28	+0.8
1,438,788	-		DDA3937_RS06440	0.28	+0.5
1,438,788	-		DDA3937_RS06440	0.28	+0.7
1,438,806	-		DDA3937_RS06440	0.32	+0.9
1,438,926	+		DDA3937_RS06440	0.63	+0.8
1,438,931	+		DDA3937_RS06440	0.64	-0.0
1,438,931	+		DDA3937_RS06440	0.64	+0.8
1,438,931	+		DDA3937_RS06440	0.64	+0.4
1,438,931	+		DDA3937_RS06440	0.64	+0.4
1,438,931	+		DDA3937_RS06440	0.64	-0.4
1,438,931	+		DDA3937_RS06440	0.64	+0.4
1,438,931	+		DDA3937_RS06440	0.64	-0.3
1,438,931	+		DDA3937_RS06440	0.64	+0.1
1,438,931	+		DDA3937_RS06440	0.64	+1.0
1,438,931	+		DDA3937_RS06440	0.64	-0.1
1,438,931	+		DDA3937_RS06440	0.64	+0.1
1,438,931	+				-1.1
1,438,931	+		DDA3937_RS06440	0.64	+0.5
1,438,931	+		DDA3937_RS06440	0.64	+0.6
1,438,931	+		DDA3937_RS06440	0.64	+0.8
1,438,931	+		DDA3937_RS06440	0.64	+0.9
1,438,932	-		DDA3937_RS06440	0.65	+1.2
1,438,932	-		DDA3937_RS06440	0.65	+0.5
1,438,932	-		DDA3937_RS06440	0.65	+0.7
1,438,932	-		DDA3937_RS06440	0.65	+1.2
1,438,936	+		DDA3937_RS06440	0.66	+0.3
1,438,936	+		DDA3937_RS06440	0.66	+1.8
1,438,936	+		DDA3937_RS06440	0.66	+1.0
1,438,937	-		DDA3937_RS06440	0.66	+0.7
1,438,937	-		DDA3937_RS06440	0.66	+0.1
1,438,971	+		DDA3937_RS06440	0.75	+0.3
1,439,024	+		DDA3937_RS06440	0.88	+0.9
1,439,025	-		DDA3937_RS06440	0.88	+0.0
1,439,025	-		DDA3937_RS06440	0.88	+0.8
1,439,025	-		DDA3937_RS06440	0.88	+0.9
1,439,027	+		DDA3937_RS06440	0.89	+0.8
1,439,027	+		DDA3937_RS06440	0.89	+0.6
1,439,027	+		DDA3937_RS06440	0.89	+0.3
1,439,027	+		DDA3937_RS06440	0.89	-0.4
1,439,027	+		DDA3937_RS06440	0.89	+0.5
1,439,028	-		DDA3937_RS06440	0.89	+0.4