Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06075

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,366,427	-		DDA3937_RS06070	0.49	-1.1
1,366,507	+		DDA3937_RS06070	0.57	-0.1
1,366,508	-		DDA3937_RS06070	0.57	-0.4
1,366,509	+		DDA3937_RS06070	0.57	-0.4
1,366,660	+		DDA3937_RS06070	0.71	-0.2
1,366,661	-		DDA3937_RS06070	0.72	-0.2
1,366,671	-		DDA3937_RS06070	0.73	+0.7
1,366,708	-		DDA3937_RS06070	0.76	+0.3
1,366,708	-		DDA3937_RS06070	0.76	-0.8
1,366,708	-		DDA3937_RS06070	0.76	-1.5
1,366,708	-		DDA3937_RS06070	0.76	-0.8
1,366,708	-		DDA3937_RS06070	0.76	-2.6
1,366,756	+		DDA3937_RS06070	0.81	-0.3
1,366,756	+		DDA3937_RS06070	0.81	+0.4
1,366,756	+		DDA3937_RS06070	0.81	-0.8
1,366,756	+		DDA3937_RS06070	0.81	-0.7
1,366,756	+		DDA3937_RS06070	0.81	+1.2
1,366,757	-		DDA3937_RS06070	0.81	+0.9
1,366,757	-		DDA3937_RS06070	0.81	+0.2
1,366,757	-		DDA3937_RS06070	0.81	+0.2
1,366,757	-		DDA3937_RS06070	0.81	-1.9
1,366,757	-		DDA3937_RS06070	0.81	+0.0
1,366,757	-		DDA3937_RS06070	0.81	-0.0
1,366,757	-		DDA3937_RS06070	0.81	-0.4
1,366,758	+		DDA3937_RS06070	0.81	-0.3
1,366,890	+				-0.7
1,366,891	-				+0.5
1,366,891	-				-1.5
1,366,968	-				-0.9
1,366,968	-				-0.1
1,366,968	-				-0.5
1,366,968	-				+0.6
1,366,968	-				-0.3
1,366,968	-				+0.4
1,366,968	-				-1.0
1,366,968	-				+0.8
1,366,968	-				-1.5
1,366,968	-				-0.8
1,366,970	-				-0.6
1,366,970	-				-0.5
1,366,970	-				-0.2
1,366,970	-				+0.4
1,366,972	-				+0.2
1,366,972	-				+0.1
1,366,972	-				-0.7
1,366,980	+				-1.0
1,366,981	-				+0.2
1,367,027	+				-0.9
1,367,027	+				-0.4
1,367,031	+				-0.4
1,367,031	+				+0.3
1,367,031	+				+0.7
1,367,031	+				-0.6
1,367,031	+				+1.2
1,367,031	+				+0.6
1,367,035	+				-0.2
1,367,035	+				+0.6
1,367,035	+				-0.0
1,367,035	+				-0.0
1,367,036	-				-0.8
1,367,036	-				-0.3
1,367,036	-				+0.2
1,367,083	+				-0.7
1,367,083	+				+0.1
1,367,083	+				-1.6
1,367,083	+				-1.2
1,367,084	-				+0.8
1,367,092	+				+0.6
1,367,092	+				+0.5
1,367,125	+				+0.2
1,367,125	+				-0.3
1,367,125	+				+0.5
1,367,147	-				-0.1
1,367,187	+				+0.9
1,367,187	+				+0.4
1,367,187	+				+0.8
1,367,187	+				-1.0
1,367,187	+				+1.2
1,367,188	-				+0.8
1,367,188	-				+0.1
1,367,188	-				-0.4
1,367,188	-				+0.4
1,367,200	+				-0.1
1,367,201	-				-0.5
1,367,219	+				-1.1
1,367,230	+				+0.1
1,367,231	-				-0.9
1,367,254	+				-0.2
1,367,255	-				+0.1
1,367,301	+		DDA3937_RS06075	0.13	-1.4
1,367,301	+		DDA3937_RS06075	0.13	+0.6
1,367,301	+		DDA3937_RS06075	0.13	-1.0
1,367,302	-		DDA3937_RS06075	0.13	-0.9
1,367,302	-		DDA3937_RS06075	0.13	-0.8
1,367,344	-		DDA3937_RS06075	0.19	-0.4
1,367,674	+		DDA3937_RS06075	0.65	-2.8
1,367,675	-		DDA3937_RS06075	0.65	+0.5
1,367,839	-		DDA3937_RS06075	0.88	-0.9
1,367,881	+				-0.8
1,367,882	-				-0.6
1,367,936	+				-1.1
1,368,055	+				-1.6
1,368,080	+				-2.4
1,368,080	+				-0.4
1,368,080	+				+0.6
1,368,080	+				+1.0
1,368,080	+				-1.1
1,368,080	+				-2.4
1,368,084	-				-0.1
1,368,095	-				-0.7
1,368,098	+				+0.9
1,368,098	+				+0.6
1,368,098	+				-0.1
1,368,098	+				-0.9
1,368,099	-				-0.4
1,368,099	-				+1.4
1,368,212	+		DDA3937_RS06080	0.19	+0.6
1,368,213	-		DDA3937_RS06080	0.19	+1.6
1,368,239	+		DDA3937_RS06080	0.25	+0.2
1,368,255	+		DDA3937_RS06080	0.28	-0.2
1,368,255	+		DDA3937_RS06080	0.28	-1.3
1,368,255	+		DDA3937_RS06080	0.28	+0.2
1,368,276	+		DDA3937_RS06080	0.33	-0.3
1,368,301	+		DDA3937_RS06080	0.39	-0.0
1,368,302	-		DDA3937_RS06080	0.39	-1.4
1,368,338	+		DDA3937_RS06080	0.47	-0.1
1,368,626	-				-2.6
1,368,654	-				+0.2
1,368,659	+				+0.2
1,368,659	+				+1.2