Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05795

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,294,008	+		DDA3937_RS05790	0.25	-1.7
1,294,008	+		DDA3937_RS05790	0.25	-2.1
1,294,008	+		DDA3937_RS05790	0.25	+0.4
1,294,008	+		DDA3937_RS05790	0.25	+0.9
1,294,009	-		DDA3937_RS05790	0.25	-1.0
1,294,059	+		DDA3937_RS05790	0.33	+0.5
1,294,060	-		DDA3937_RS05790	0.33	+0.1
1,294,068	+		DDA3937_RS05790	0.34	-0.0
1,294,171	+				+0.6
1,294,172	-		DDA3937_RS05790	0.52	+0.9
1,294,324	+		DDA3937_RS05790	0.77	-1.3
1,294,324	+		DDA3937_RS05790	0.77	-0.5
1,294,324	+		DDA3937_RS05790	0.77	-1.2
1,294,325	-		DDA3937_RS05790	0.77	-2.0
1,294,325	-		DDA3937_RS05790	0.77	-1.4
1,294,325	-		DDA3937_RS05790	0.77	-0.7
1,294,325	-		DDA3937_RS05790	0.77	-0.6
1,294,567	-				-2.7
1,294,607	+				-1.1
1,294,607	+				+0.1
1,294,611	+				+0.4
1,294,611	+				-0.3
1,294,611	+				-0.1
1,294,611	+				-1.3
1,294,612	-				+0.3
1,294,612	-				-1.3
1,294,615	+				+0.3
1,294,615	+				-0.7
1,294,615	+				-1.0
1,294,627	+				-0.3
1,294,627	+				-1.8
1,294,627	+				+0.1
1,294,627	+				-2.3
1,294,627	+				+0.3
1,294,627	+				-0.3
1,294,627	+				+0.3
1,294,627	+				-1.7
1,294,628	-				+2.1
1,294,630	+				-0.9
1,294,631	-				-1.3
1,294,638	-				-0.2
1,294,638	-				+0.3
1,294,807	-				+0.4
1,294,922	+		DDA3937_RS05795	0.15	-0.3
1,295,031	-		DDA3937_RS05795	0.21	+0.7
1,295,121	+		DDA3937_RS05795	0.26	-0.3
1,295,121	+				-1.7
1,295,367	-		DDA3937_RS05795	0.39	-0.6
1,295,394	+		DDA3937_RS05795	0.40	-0.5
1,295,395	-		DDA3937_RS05795	0.40	-0.1
1,295,395	-		DDA3937_RS05795	0.40	+1.0
1,295,395	-		DDA3937_RS05795	0.40	-1.1
1,295,395	-		DDA3937_RS05795	0.40	-0.3
1,295,397	-		DDA3937_RS05795	0.40	-1.0
1,295,397	-		DDA3937_RS05795	0.40	-2.3
1,295,466	+		DDA3937_RS05795	0.44	+1.4
1,295,467	-		DDA3937_RS05795	0.44	-1.2
1,295,467	-		DDA3937_RS05795	0.44	-0.7
1,295,481	+		DDA3937_RS05795	0.45	+0.1
1,295,481	+		DDA3937_RS05795	0.45	-0.1
1,295,481	+		DDA3937_RS05795	0.45	-0.3
1,295,482	-		DDA3937_RS05795	0.45	-1.1
1,295,508	-		DDA3937_RS05795	0.46	-1.0
1,295,545	-		DDA3937_RS05795	0.48	-0.5
1,295,545	-		DDA3937_RS05795	0.48	+0.0
1,295,595	+		DDA3937_RS05795	0.51	-2.1
1,295,595	+		DDA3937_RS05795	0.51	+0.7
1,295,596	-		DDA3937_RS05795	0.51	-0.7
1,295,596	-		DDA3937_RS05795	0.51	-2.0
1,295,596	-		DDA3937_RS05795	0.51	-0.4
1,295,901	+		DDA3937_RS05795	0.67	-1.0
1,295,901	+		DDA3937_RS05795	0.67	-0.3
1,295,902	-		DDA3937_RS05795	0.67	-1.1
1,295,902	-		DDA3937_RS05795	0.67	-0.4
1,295,937	+		DDA3937_RS05795	0.69	+1.3
1,295,938	-				-1.7
1,295,938	-		DDA3937_RS05795	0.69	-0.7
1,295,938	-		DDA3937_RS05795	0.69	+0.3
1,295,938	-		DDA3937_RS05795	0.69	+0.7
1,295,940	+		DDA3937_RS05795	0.69	-0.1
1,295,940	+		DDA3937_RS05795	0.69	+0.0
1,295,940	+		DDA3937_RS05795	0.69	-1.1
1,295,940	+		DDA3937_RS05795	0.69	-0.7
1,295,941	-		DDA3937_RS05795	0.69	-1.7
1,295,958	+		DDA3937_RS05795	0.70	-1.1
1,295,958	+		DDA3937_RS05795	0.70	-1.1
1,296,057	+		DDA3937_RS05795	0.75	-0.6
1,296,057	+		DDA3937_RS05795	0.75	-1.1
1,296,057	+		DDA3937_RS05795	0.75	+0.0
1,296,057	+		DDA3937_RS05795	0.75	-0.5
1,296,058	-		DDA3937_RS05795	0.75	-0.7
1,296,342	+				-0.1
1,296,479	+				+3.6
1,296,509	-				-0.7
1,296,526	+				-0.9
1,296,545	+				-0.6
1,296,546	-				-0.7
1,296,615	+				-0.4
1,296,615	+				-0.1
1,296,616	-				-0.5
1,296,616	-				-1.0
1,296,616	-				+0.8
1,296,616	-				-0.6
1,296,616	-				-0.4
1,296,616	-				+0.1
1,296,726	+				+0.1
1,297,502	+				+0.1
1,297,502	+				-2.0
1,297,502	+				-0.5
1,297,503	-				+0.6