Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS03700 and DDA3937_RS03705 are separated by 138 nucleotides DDA3937_RS03705 and DDA3937_RS03710 are separated by 56 nucleotides
DDA3937_RS03700: DDA3937_RS03700 - inositol 2-dehydrogenase, at 818,314 to 819,300
_RS03700
DDA3937_RS03705: DDA3937_RS03705 - substrate-binding domain-containing protein, at 819,439 to 820,377
_RS03705
DDA3937_RS03710: DDA3937_RS03710 - sugar ABC transporter ATP-binding protein, at 820,434 to 821,981
_RS03710
Position (kb) 819
820
821 Strain fitness (log2 ratio) -2
-1
0
1
2 at 818.445 kb on + strand, within DDA3937_RS03700 at 818.449 kb on + strand, within DDA3937_RS03700 at 818.450 kb on - strand, within DDA3937_RS03700 at 818.499 kb on - strand, within DDA3937_RS03700 at 818.754 kb on + strand, within DDA3937_RS03700 at 818.755 kb on - strand, within DDA3937_RS03700 at 818.788 kb on + strand, within DDA3937_RS03700 at 818.788 kb on + strand, within DDA3937_RS03700 at 818.789 kb on - strand, within DDA3937_RS03700 at 819.066 kb on + strand, within DDA3937_RS03700 at 819.157 kb on + strand, within DDA3937_RS03700 at 819.202 kb on - strand at 819.244 kb on + strand at 819.245 kb on - strand at 819.304 kb on - strand at 819.338 kb on + strand at 819.338 kb on + strand at 819.338 kb on + strand at 819.338 kb on + strand at 819.339 kb on - strand at 819.339 kb on - strand at 819.339 kb on - strand at 819.339 kb on - strand at 819.344 kb on + strand at 819.351 kb on + strand at 819.351 kb on + strand at 819.351 kb on + strand at 819.351 kb on + strand at 819.351 kb on + strand at 819.352 kb on - strand at 819.352 kb on - strand at 819.355 kb on + strand at 819.355 kb on + strand at 819.356 kb on - strand at 819.369 kb on - strand at 819.369 kb on - strand at 819.369 kb on - strand at 819.369 kb on - strand at 819.369 kb on - strand at 819.369 kb on - strand at 819.385 kb on + strand at 819.385 kb on + strand at 819.386 kb on - strand at 819.386 kb on - strand at 819.386 kb on - strand at 819.386 kb on - strand at 819.389 kb on + strand at 819.389 kb on + strand at 819.389 kb on + strand at 819.390 kb on - strand at 819.390 kb on - strand at 819.390 kb on - strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.410 kb on + strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.411 kb on - strand at 819.414 kb on + strand at 819.414 kb on + strand at 819.414 kb on + strand at 819.415 kb on - strand at 819.415 kb on - strand at 819.415 kb on - strand at 819.424 kb on + strand at 819.425 kb on - strand at 819.425 kb on - strand at 819.528 kb on + strand at 819.528 kb on + strand at 819.529 kb on - strand at 819.534 kb on + strand, within DDA3937_RS03705 at 819.535 kb on - strand, within DDA3937_RS03705 at 819.823 kb on + strand, within DDA3937_RS03705 at 819.823 kb on + strand, within DDA3937_RS03705 at 819.823 kb on + strand, within DDA3937_RS03705 at 819.823 kb on + strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.824 kb on - strand, within DDA3937_RS03705 at 819.973 kb on + strand, within DDA3937_RS03705 at 819.973 kb on + strand, within DDA3937_RS03705 at 819.974 kb on - strand, within DDA3937_RS03705 at 820.057 kb on - strand, within DDA3937_RS03705 at 820.275 kb on + strand, within DDA3937_RS03705 at 820.376 kb on - strand at 820.429 kb on - strand at 820.455 kb on - strand at 820.568 kb on + strand at 820.569 kb on - strand at 820.692 kb on + strand, within DDA3937_RS03710 at 820.692 kb on + strand, within DDA3937_RS03710 at 820.692 kb on + strand, within DDA3937_RS03710 at 820.693 kb on - strand, within DDA3937_RS03710 at 820.719 kb on - strand, within DDA3937_RS03710 at 820.719 kb on - strand, within DDA3937_RS03710 at 820.821 kb on + strand, within DDA3937_RS03710 at 820.821 kb on + strand, within DDA3937_RS03710 at 820.821 kb on + strand, within DDA3937_RS03710 at 820.821 kb on + strand, within DDA3937_RS03710 at 820.822 kb on - strand, within DDA3937_RS03710 at 820.822 kb on - strand, within DDA3937_RS03710 at 820.837 kb on + strand, within DDA3937_RS03710 at 820.837 kb on + strand, within DDA3937_RS03710 at 820.838 kb on - strand, within DDA3937_RS03710 at 820.838 kb on - strand, within DDA3937_RS03710 at 821.025 kb on + strand, within DDA3937_RS03710 at 821.025 kb on + strand, within DDA3937_RS03710 at 821.025 kb on + strand, within DDA3937_RS03710 at 821.026 kb on - strand, within DDA3937_RS03710 at 821.026 kb on - strand, within DDA3937_RS03710 at 821.026 kb on - strand, within DDA3937_RS03710 at 821.077 kb on + strand, within DDA3937_RS03710 at 821.077 kb on + strand at 821.077 kb on + strand, within DDA3937_RS03710 at 821.078 kb on - strand, within DDA3937_RS03710 at 821.094 kb on + strand, within DDA3937_RS03710
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 818,445 + DDA3937_RS03700 0.13 -0.3 818,449 + DDA3937_RS03700 0.14 -0.2 818,450 - DDA3937_RS03700 0.14 -0.8 818,499 - DDA3937_RS03700 0.19 -0.5 818,754 + DDA3937_RS03700 0.45 +0.2 818,755 - DDA3937_RS03700 0.45 +0.9 818,788 + DDA3937_RS03700 0.48 +0.5 818,788 + DDA3937_RS03700 0.48 -0.0 818,789 - DDA3937_RS03700 0.48 -0.5 819,066 + DDA3937_RS03700 0.76 +0.5 819,157 + DDA3937_RS03700 0.85 -0.9 819,202 - -0.2 819,244 + +0.1 819,245 - -0.2 819,304 - -0.1 819,338 + -0.1 819,338 + +0.0 819,338 + +0.4 819,338 + -0.1 819,339 - -0.1 819,339 - +0.2 819,339 - -1.0 819,339 - -0.5 819,344 + +0.7 819,351 + +0.9 819,351 + +1.2 819,351 + -0.3 819,351 + -0.2 819,351 + -1.9 819,352 - -0.0 819,352 - -0.2 819,355 + +0.2 819,355 + +0.1 819,356 - -0.7 819,369 - -0.5 819,369 - -0.6 819,369 - -0.0 819,369 - -0.2 819,369 - +0.6 819,369 - -0.9 819,385 + +1.5 819,385 + -0.2 819,386 - -0.3 819,386 - +0.4 819,386 - +1.2 819,386 - +0.1 819,389 + -0.5 819,389 + -1.1 819,389 + +0.5 819,390 - -0.5 819,390 - -0.0 819,390 - +0.5 819,410 + -0.8 819,410 + -2.1 819,410 + -0.3 819,410 + +0.1 819,410 + -1.5 819,410 + +0.2 819,410 + +0.9 819,411 - -1.3 819,411 - -0.5 819,411 - +0.9 819,411 - -0.9 819,411 - +2.3 819,411 - -0.5 819,411 - +1.1 819,411 - -1.1 819,411 - -0.7 819,414 + +0.8 819,414 + -0.5 819,414 + +0.7 819,415 - -0.7 819,415 - -0.8 819,415 - -1.1 819,424 + +0.5 819,425 - +0.2 819,425 - +0.4 819,528 + +0.3 819,528 + -0.4 819,529 - -0.3 819,534 + DDA3937_RS03705 0.10 -1.1 819,535 - DDA3937_RS03705 0.10 -0.8 819,823 + DDA3937_RS03705 0.41 -0.0 819,823 + DDA3937_RS03705 0.41 -0.4 819,823 + DDA3937_RS03705 0.41 +0.4 819,823 + DDA3937_RS03705 0.41 -1.1 819,824 - DDA3937_RS03705 0.41 +0.3 819,824 - DDA3937_RS03705 0.41 -1.0 819,824 - DDA3937_RS03705 0.41 -0.9 819,824 - DDA3937_RS03705 0.41 +0.5 819,824 - DDA3937_RS03705 0.41 -0.2 819,824 - DDA3937_RS03705 0.41 -1.1 819,824 - DDA3937_RS03705 0.41 -0.5 819,973 + DDA3937_RS03705 0.57 -0.7 819,973 + DDA3937_RS03705 0.57 -0.3 819,974 - DDA3937_RS03705 0.57 -0.1 820,057 - DDA3937_RS03705 0.66 -0.9 820,275 + DDA3937_RS03705 0.89 -0.9 820,376 - +0.9 820,429 - -0.5 820,455 - +0.3 820,568 + +0.0 820,569 - +0.0 820,692 + DDA3937_RS03710 0.17 -1.3 820,692 + DDA3937_RS03710 0.17 +0.5 820,692 + DDA3937_RS03710 0.17 -0.2 820,693 - DDA3937_RS03710 0.17 +1.1 820,719 - DDA3937_RS03710 0.18 -0.3 820,719 - DDA3937_RS03710 0.18 +0.2 820,821 + DDA3937_RS03710 0.25 -0.9 820,821 + DDA3937_RS03710 0.25 +0.9 820,821 + DDA3937_RS03710 0.25 +0.3 820,821 + DDA3937_RS03710 0.25 +0.8 820,822 - DDA3937_RS03710 0.25 -0.0 820,822 - DDA3937_RS03710 0.25 +0.6 820,837 + DDA3937_RS03710 0.26 +0.2 820,837 + DDA3937_RS03710 0.26 +0.3 820,838 - DDA3937_RS03710 0.26 -0.2 820,838 - DDA3937_RS03710 0.26 +0.3 821,025 + DDA3937_RS03710 0.38 -0.4 821,025 + DDA3937_RS03710 0.38 +0.2 821,025 + DDA3937_RS03710 0.38 +0.3 821,026 - DDA3937_RS03710 0.38 -0.4 821,026 - DDA3937_RS03710 0.38 -0.9 821,026 - DDA3937_RS03710 0.38 +0.0 821,077 + DDA3937_RS03710 0.42 +1.0 821,077 + +0.1 821,077 + DDA3937_RS03710 0.42 +0.0 821,078 - DDA3937_RS03710 0.42 -2.5 821,094 + DDA3937_RS03710 0.43 -0.1
Or see this region's nucleotide sequence