Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23425

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,294,695	-				-0.8
2,294,773	+				+0.3
2,294,841	+				-1.8
2,294,841	+				-0.6
2,294,841	+				+0.5
2,294,842	-				-0.2
2,294,850	+				-0.0
2,294,933	-		DDA3937_RS10175	0.16	-0.4
2,294,978	+		DDA3937_RS10175	0.22	-1.1
2,294,979	-		DDA3937_RS10175	0.22	-0.3
2,294,980	+		DDA3937_RS10175	0.23	-0.4
2,294,980	+		DDA3937_RS10175	0.23	-1.1
2,294,981	-		DDA3937_RS10175	0.23	-1.1
2,294,985	-		DDA3937_RS10175	0.23	-0.1
2,295,004	-		DDA3937_RS10175	0.26	-0.6
2,295,053	-		DDA3937_RS10175	0.32	-1.6
2,295,122	+		DDA3937_RS10175	0.42	+0.1
2,295,123	-		DDA3937_RS10175	0.42	+0.1
2,295,151	+		DDA3937_RS10175	0.46	+0.1
2,295,151	+				+2.5
2,295,169	+		DDA3937_RS10175	0.48	+0.6
2,295,169	+		DDA3937_RS10175	0.48	-0.4
2,295,170	-		DDA3937_RS10175	0.48	-0.1
2,295,170	-		DDA3937_RS10175	0.48	+0.4
2,295,170	-		DDA3937_RS10175	0.48	-0.8
2,295,303	+		DDA3937_RS10175	0.66	-2.1
2,295,303	+		DDA3937_RS10175	0.66	+0.3
2,295,303	+		DDA3937_RS10175	0.66	+0.0
2,295,303	+		DDA3937_RS10175	0.66	-0.2
2,295,304	-		DDA3937_RS10175	0.66	-0.1
2,295,304	-		DDA3937_RS10175	0.66	-0.3
2,295,374	+		DDA3937_RS10175	0.76	-0.5
2,295,374	+		DDA3937_RS10175	0.76	-0.1
2,295,375	-		DDA3937_RS10175	0.76	-0.8
2,295,377	-		DDA3937_RS10175	0.76	+0.9
2,295,385	+		DDA3937_RS10175	0.77	-0.6
2,295,389	-		DDA3937_RS10175	0.78	-0.3
2,295,556	+				+0.3
2,295,629	-				-0.8
2,295,728	-		DDA3937_RS23425	0.59	-0.9
2,295,760	-		DDA3937_RS23425	0.80	-0.4
2,295,760	-		DDA3937_RS23425	0.80	-0.8
2,295,762	+		DDA3937_RS23425	0.81	-1.2
2,295,762	+		DDA3937_RS23425	0.81	-0.5
2,295,774	+		DDA3937_RS23425	0.89	-0.3
2,295,775	-				+0.1
2,295,780	+				-0.7
2,295,780	+				+2.5
2,295,781	-				-0.7
2,295,781	-				-0.3
2,295,783	+				+0.3
2,295,783	+				+1.4
2,295,783	+				+0.3
2,295,784	-				+1.9
2,295,817	+				-2.4
2,295,818	-				+0.6
2,295,866	+				+1.5
2,295,866	+				-0.3
2,295,866	+				+0.7
2,295,866	+				+1.1
2,295,866	+				+0.1
2,295,866	+				-0.8
2,295,866	+				+0.5
2,295,866	+				+0.1
2,295,867	-				-0.5
2,295,867	-				-0.3
2,295,913	+				-0.1
2,295,913	+				+0.3
2,295,913	+				+0.3
2,295,914	-				-1.3
2,295,931	+				-1.2
2,295,931	+				-0.5
2,295,932	-				-0.1
2,296,183	+				-0.7
2,296,183	+		DDA3937_RS10180	0.22	-0.9
2,296,183	+		DDA3937_RS10180	0.22	-0.9
2,296,183	+		DDA3937_RS10180	0.22	-0.3
2,296,183	+		DDA3937_RS10180	0.22	-0.1
2,296,184	-		DDA3937_RS10180	0.22	+0.0
2,296,184	-		DDA3937_RS10180	0.22	-0.1
2,296,239	+		DDA3937_RS10180	0.27	-0.3
2,296,379	+		DDA3937_RS10180	0.39	+1.0
2,296,528	+		DDA3937_RS10180	0.52	-0.5
2,296,528	+		DDA3937_RS10180	0.52	-1.4
2,296,528	+		DDA3937_RS10180	0.52	+1.6
2,296,528	+		DDA3937_RS10180	0.52	+0.4
2,296,528	+		DDA3937_RS10180	0.52	-0.7
2,296,528	+		DDA3937_RS10180	0.52	+0.5
2,296,529	-		DDA3937_RS10180	0.52	+0.4
2,296,529	-		DDA3937_RS10180	0.52	-0.1
2,296,529	-				-0.1
2,296,529	-		DDA3937_RS10180	0.52	-0.0
2,296,530	+		DDA3937_RS10180	0.52	-0.6
2,296,674	+		DDA3937_RS10180	0.65	+0.7