Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,755,965	-		DDA3937_RS16470	0.80	+0.1
3,756,074	+				+0.0
3,756,087	-				+1.3
3,756,249	+		DDA3937_RS16475	0.19	-1.3
3,756,250	-		DDA3937_RS16475	0.19	-0.0
3,756,266	-		DDA3937_RS16475	0.21	-0.7
3,756,386	-		DDA3937_RS16475	0.39	-0.7
3,756,554	-				-0.3
3,756,558	-		DDA3937_RS16475	0.64	-0.8
3,756,560	-		DDA3937_RS16475	0.64	-1.7
3,756,589	+		DDA3937_RS16475	0.68	+0.7
3,756,590	-		DDA3937_RS16475	0.69	-1.3
3,756,590	-				-0.1
3,756,590	-		DDA3937_RS16475	0.69	-1.6
3,756,590	-		DDA3937_RS16475	0.69	-0.3
3,756,636	-		DDA3937_RS16475	0.75	-0.5
3,756,724	-		DDA3937_RS16475	0.88	-0.9
3,756,730	+		DDA3937_RS16475	0.89	+0.5
3,756,732	+		DDA3937_RS16475	0.89	-0.0
3,756,733	-		DDA3937_RS16475	0.89	-1.7
3,756,733	-		DDA3937_RS16475	0.89	+0.6
3,756,805	+				+0.0
3,756,805	+				+0.4
3,756,805	+				+0.1
3,756,806	-				+0.9
3,756,832	+				+0.1
3,756,838	-				-0.4
3,756,860	+				-2.3
3,756,861	-				+1.6
3,756,861	-				-0.9
3,756,866	+				-1.4
3,756,873	+				+0.5
3,756,884	+				+2.1
3,756,890	-				+0.5
3,756,967	-				-0.5
3,757,023	-		DDA3937_RS21690	0.26	-0.9
3,757,077	+		DDA3937_RS21690	0.51	-0.7
3,757,078	-		DDA3937_RS21690	0.52	-0.4
3,757,078	-		DDA3937_RS21690	0.52	-0.2
3,757,081	+		DDA3937_RS21690	0.53	-0.5
3,757,082	-		DDA3937_RS21690	0.53	+0.1
3,757,082	-		DDA3937_RS21690	0.53	-1.3
3,757,093	+		DDA3937_RS21690	0.58	-0.3
3,757,093	+		DDA3937_RS21690	0.58	-2.6
3,757,098	+		DDA3937_RS21690	0.61	-0.3
3,757,263	+				+0.5
3,757,274	+				+0.0
3,757,282	+				-1.8
3,757,282	+				-1.1
3,757,283	-				+0.3
3,757,336	+				+0.2
3,757,347	+				-1.4
3,757,347	+				+0.1
3,757,347	+				-0.0
3,757,347	+				-0.3
3,757,348	-				+0.3
3,757,348	-				+1.6
3,757,348	-				+0.6
3,757,356	-				-1.7
3,757,409	-				-0.2
3,757,409	-				-0.7
3,757,410	+				-1.7
3,757,411	-				+0.2
3,757,480	+				+3.1
3,757,516	-				-0.7
3,757,649	+				-0.3
3,757,649	+				+0.1
3,757,649	+				+0.6
3,757,649	+				-0.2
3,757,653	+				-0.4
3,757,653	+				-0.5
3,757,654	-				-0.3
3,757,654	-				+0.9
3,757,738	+				-0.9
3,757,739	-				-1.0
3,757,739	-				+0.6
3,757,788	-				-0.6
3,757,906	+				-1.3
3,757,988	-		DDA3937_RS16485	0.11	-1.1
3,758,017	+		DDA3937_RS16485	0.12	+0.3
3,758,018	-		DDA3937_RS16485	0.12	-0.5
3,758,018	-		DDA3937_RS16485	0.12	+0.1
3,758,018	-		DDA3937_RS16485	0.12	-0.2
3,758,021	+		DDA3937_RS16485	0.12	-0.5
3,758,021	+		DDA3937_RS16485	0.12	-2.0
3,758,022	-		DDA3937_RS16485	0.12	+0.6
3,758,112	+		DDA3937_RS16485	0.15	+0.2
3,758,113	-		DDA3937_RS16485	0.15	-0.8
3,758,166	+		DDA3937_RS16485	0.17	+0.7