Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20835

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,734,343	-		DDA3937_RS20830	0.52	+1.3
4,734,343	-		DDA3937_RS20830	0.52	+0.2
4,734,394	+		DDA3937_RS20830	0.60	+0.6
4,734,394	+		DDA3937_RS20830	0.60	+0.9
4,734,395	-		DDA3937_RS20830	0.60	-1.1
4,734,464	+		DDA3937_RS20830	0.69	+0.2
4,734,464	+		DDA3937_RS20830	0.69	+0.5
4,734,464	+		DDA3937_RS20830	0.69	+0.9
4,734,464	+		DDA3937_RS20830	0.69	+0.4
4,734,465	-		DDA3937_RS20830	0.70	-1.0
4,734,465	-		DDA3937_RS20830	0.70	+1.0
4,734,465	-		DDA3937_RS20830	0.70	+0.3
4,734,465	-		DDA3937_RS20830	0.70	+0.7
4,734,573	+		DDA3937_RS20830	0.85	+1.2
4,734,573	+		DDA3937_RS20830	0.85	+0.0
4,734,573	+		DDA3937_RS20830	0.85	+0.3
4,734,573	+		DDA3937_RS20830	0.85	+1.0
4,734,573	+		DDA3937_RS20830	0.85	+0.6
4,734,573	+		DDA3937_RS20830	0.85	+1.6
4,734,574	-		DDA3937_RS20830	0.85	+0.7
4,734,574	-		DDA3937_RS20830	0.85	+0.6
4,734,574	-		DDA3937_RS20830	0.85	+0.4
4,734,589	+		DDA3937_RS20830	0.87	-0.0
4,734,599	+		DDA3937_RS20830	0.89	+1.4
4,734,599	+		DDA3937_RS20830	0.89	+0.4
4,734,599	+		DDA3937_RS20830	0.89	+0.9
4,734,599	+		DDA3937_RS20830	0.89	-0.2
4,734,599	+		DDA3937_RS20830	0.89	+0.8
4,734,608	-		DDA3937_RS20830	0.90	-0.9
4,734,646	+				+0.3
4,734,655	+				+0.7
4,734,655	+				-1.0
4,734,695	+				+0.1
4,734,695	+				+0.3
4,734,695	+				-1.7
4,734,696	-				-0.7
4,734,696	-				-0.3
4,734,696	-				+0.4
4,734,697	+				+0.5
4,734,697	+				+1.2
4,734,697	+				-0.1
4,734,698	-				-0.1
4,734,698	-				+0.4
4,734,698	-				+0.7
4,734,698	-				+0.3
4,734,698	-				+0.7
4,734,698	-				+0.3
4,734,698	-				-0.5
4,734,701	+				+0.7
4,734,702	-				+0.6
4,734,702	-				+0.5
4,734,729	-				+1.1
4,734,733	+				-0.1
4,734,733	+				+0.1
4,734,733	+				+0.3
4,734,733	+				-0.1
4,734,734	-				-0.8
4,734,734	-				+0.6
4,734,734	-				+0.8
4,734,734	-				+0.3
4,734,757	+				+0.7
4,734,757	+				-0.3
4,734,787	-				+1.3
4,734,787	-				+0.4
4,734,787	-				+0.0
4,734,787	-				-0.0
4,734,787	-				-0.1
4,734,787	-				-1.4
4,734,943	-				-0.2
4,734,949	+				-0.3
4,734,949	+				-0.6
4,734,949	+				+0.2
4,734,950	-				-0.3
4,734,950	-				+0.6
4,735,018	-				+0.2
4,735,018	-				-0.5
4,735,140	+				-1.3
4,735,146	+				+0.1
4,735,157	-				+0.6
4,735,235	+				-0.3
4,735,235	+				+0.5
4,735,235	+				-0.5
4,735,235	+				+0.1
4,735,235	+				+0.3
4,735,235	+				+0.6
4,735,236	-				+0.4
4,735,236	-				+0.4
4,735,236	-				+0.4
4,735,236	-				+0.8
4,735,236	-				+2.5
4,735,236	-				+0.2
4,735,236	-				+0.8
4,735,236	-				+0.5
4,735,236	-				+1.0
4,735,236	-				+0.8
4,735,276	+				-1.1
4,735,277	-				+1.2
4,735,277	-				+0.6
4,735,338	+				+0.9
4,735,338	+				+0.3
4,735,338	+				+0.6
4,735,338	+				+0.4
4,735,338	+				+1.1
4,735,339	-				+0.4
4,735,339	-				+0.1
4,735,339	-				-0.6
4,735,339	-				+0.7
4,735,339	-				+1.3
4,735,346	+				+0.4
4,735,347	-				-0.7
4,735,347	-				+1.4
4,735,347	-				+0.3
4,735,347	-				+0.5
4,735,347	-				+0.7
4,735,347	-				-1.5
4,735,355	+				+1.2
4,735,361	+				+1.2
4,735,362	-				+0.0
4,735,362	-				+0.9
4,735,388	+		DDA3937_RS20835	0.12	+1.4
4,735,389	-		DDA3937_RS20835	0.12	+0.5
4,735,389	-		DDA3937_RS20835	0.12	+0.7
4,735,389	-		DDA3937_RS20835	0.12	+0.7
4,735,392	+		DDA3937_RS20835	0.13	+1.1
4,735,392	+		DDA3937_RS20835	0.13	+0.0
4,735,392	+		DDA3937_RS20835	0.13	+1.1
4,735,393	-		DDA3937_RS20835	0.13	+1.1
4,735,393	-		DDA3937_RS20835	0.13	+0.6
4,735,393	-		DDA3937_RS20835	0.13	+0.7
4,735,393	-		DDA3937_RS20835	0.13	+0.5
4,735,406	+		DDA3937_RS20835	0.15	+0.6
4,735,407	-		DDA3937_RS20835	0.15	+0.3
4,735,437	-		DDA3937_RS20835	0.21	+1.0
4,735,467	+		DDA3937_RS20835	0.26	+0.9
4,735,467	+		DDA3937_RS20835	0.26	+0.4
4,735,467	+		DDA3937_RS20835	0.26	+0.7
4,735,467	+		DDA3937_RS20835	0.26	+1.1
4,735,467	+		DDA3937_RS20835	0.26	-0.7
4,735,468	-		DDA3937_RS20835	0.26	+0.6
4,735,468	-		DDA3937_RS20835	0.26	+0.9
4,735,468	-		DDA3937_RS20835	0.26	+2.4
4,735,468	-		DDA3937_RS20835	0.26	+0.8
4,735,468	-		DDA3937_RS20835	0.26	+0.8
4,735,468	-		DDA3937_RS20835	0.26	-0.2
4,735,468	-		DDA3937_RS20835	0.26	+1.1
4,735,469	+		DDA3937_RS20835	0.26	+0.8
4,735,469	+		DDA3937_RS20835	0.26	+0.9
4,735,469	+		DDA3937_RS20835	0.26	+0.4
4,735,469	+		DDA3937_RS20835	0.26	+1.0
4,735,469	+		DDA3937_RS20835	0.26	+0.6
4,735,469	+		DDA3937_RS20835	0.26	+1.1
4,735,470	-		DDA3937_RS20835	0.27	-0.5
4,735,470	-		DDA3937_RS20835	0.27	+0.3
4,735,470	-		DDA3937_RS20835	0.27	-0.5
4,735,470	-		DDA3937_RS20835	0.27	+1.5
4,735,470	-		DDA3937_RS20835	0.27	+0.9
4,735,470	-		DDA3937_RS20835	0.27	-0.5
4,735,470	-		DDA3937_RS20835	0.27	+0.4
4,735,493	+		DDA3937_RS20835	0.31	+1.1
4,735,493	+		DDA3937_RS20835	0.31	+0.2
4,735,493	+		DDA3937_RS20835	0.31	+0.6
4,735,494	-		DDA3937_RS20835	0.31	-1.0
4,735,494	-		DDA3937_RS20835	0.31	-0.9
4,735,494	-		DDA3937_RS20835	0.31	+0.2
4,735,496	+		DDA3937_RS20835	0.31	+0.9
4,735,496	+		DDA3937_RS20835	0.31	-0.3
4,735,496	+				+0.7
4,735,497	-		DDA3937_RS20835	0.31	+0.5
4,735,541	+		DDA3937_RS20835	0.39	+0.6
4,735,541	+		DDA3937_RS20835	0.39	+1.4
4,735,542	-		DDA3937_RS20835	0.39	+0.2
4,735,566	+		DDA3937_RS20835	0.44	+1.0
4,735,566	+		DDA3937_RS20835	0.44	+0.5
4,735,566	+		DDA3937_RS20835	0.44	+0.3
4,735,566	+		DDA3937_RS20835	0.44	-1.8
4,735,567	-		DDA3937_RS20835	0.44	+0.7
4,735,567	-		DDA3937_RS20835	0.44	-0.6
4,735,567	-		DDA3937_RS20835	0.44	+1.7
4,735,567	-		DDA3937_RS20835	0.44	+1.1
4,735,567	-		DDA3937_RS20835	0.44	+0.7
4,735,574	+		DDA3937_RS20835	0.45	-0.5
4,735,574	+		DDA3937_RS20835	0.45	+0.9
4,735,574	+		DDA3937_RS20835	0.45	+0.4
4,735,575	-		DDA3937_RS20835	0.45	+0.7
4,735,600	+		DDA3937_RS20835	0.50	+0.2
4,735,601	-		DDA3937_RS20835	0.50	+0.5
4,735,719	+		DDA3937_RS20835	0.71	-0.4
4,735,719	+		DDA3937_RS20835	0.71	+0.4
4,735,720	-		DDA3937_RS20835	0.71	+1.7
4,735,720	-		DDA3937_RS20835	0.71	-0.3
4,735,740	+		DDA3937_RS20835	0.74	+0.7
4,735,811	+				+0.7
4,735,860	-				+0.7
4,735,862	+				+1.6
4,735,877	+				-0.9
4,735,877	+				+0.3
4,735,878	-				-0.3
4,735,881	+				+1.2
4,735,881	+				-0.4
4,735,882	-				-0.5
4,735,882	-				+0.0
4,735,885	+				+0.1
4,735,885	+				-1.3
4,735,885	+				+1.5
4,735,886	-				-0.3
4,735,887	-				-1.0
4,735,891	-				-2.1
4,736,021	+				+0.2
4,736,021	+				-0.2
4,736,021	+				-0.3
4,736,021	+				-0.6
4,736,021	+				-1.4
4,736,021	+				-0.2
4,736,022	-				-0.2
4,736,065	-		DDA3937_RS20840	0.11	+0.0
4,736,099	+		DDA3937_RS20840	0.14	-0.9
4,736,104	-		DDA3937_RS20840	0.15	+1.0
4,736,134	+		DDA3937_RS20840	0.17	+0.3
4,736,134	+				-1.3
4,736,134	+		DDA3937_RS20840	0.17	-0.1
4,736,134	+		DDA3937_RS20840	0.17	-0.1
4,736,135	-		DDA3937_RS20840	0.18	+0.1
4,736,135	-		DDA3937_RS20840	0.18	-0.1
4,736,135	-		DDA3937_RS20840	0.18	+0.6
4,736,293	+		DDA3937_RS20840	0.32	-0.2
4,736,293	+		DDA3937_RS20840	0.32	-0.6
4,736,294	-		DDA3937_RS20840	0.32	+0.1
4,736,294	-		DDA3937_RS20840	0.32	-0.2
4,736,432	+		DDA3937_RS20840	0.45	+0.0
4,736,433	-		DDA3937_RS20840	0.45	-0.2
4,736,470	+		DDA3937_RS20840	0.48	+0.0
4,736,470	+		DDA3937_RS20840	0.48	-2.3
4,736,471	-		DDA3937_RS20840	0.48	+1.0
4,736,471	-		DDA3937_RS20840	0.48	+1.0
4,736,521	+		DDA3937_RS20840	0.53	-1.3
4,736,521	+		DDA3937_RS20840	0.53	-0.5
4,736,521	+		DDA3937_RS20840	0.53	-0.1
4,736,521	+				-0.8
4,736,521	+		DDA3937_RS20840	0.53	+0.0
4,736,522	-		DDA3937_RS20840	0.53	+0.3
4,736,522	-		DDA3937_RS20840	0.53	+0.3
4,736,624	+		DDA3937_RS20840	0.62	-0.7
4,736,624	+		DDA3937_RS20840	0.62	+0.1
4,736,624	+		DDA3937_RS20840	0.62	+1.2
4,736,624	+		DDA3937_RS20840	0.62	-0.8
4,736,625	-		DDA3937_RS20840	0.63	-0.2
4,736,625	-		DDA3937_RS20840	0.63	+0.6
4,736,707	+		DDA3937_RS20840	0.70	-0.7
4,736,707	+		DDA3937_RS20840	0.70	-1.1
4,736,707	+		DDA3937_RS20840	0.70	-1.3
4,736,707	+		DDA3937_RS20840	0.70	-0.2
4,736,707	+		DDA3937_RS20840	0.70	-1.3
4,736,707	+		DDA3937_RS20840	0.70	-0.6
4,736,707	+		DDA3937_RS20840	0.70	+0.3
4,736,708	-		DDA3937_RS20840	0.70	-0.8
4,736,708	-		DDA3937_RS20840	0.70	-0.2
4,736,708	-		DDA3937_RS20840	0.70	-0.3
4,736,708	-				+2.3
4,736,708	-		DDA3937_RS20840	0.70	-0.2
4,736,708	-		DDA3937_RS20840	0.70	-0.9
4,736,708	-		DDA3937_RS20840	0.70	-1.0
4,736,708	-		DDA3937_RS20840	0.70	+0.3
4,736,758	+		DDA3937_RS20840	0.75	-1.3
4,736,758	+				+0.2
4,736,758	+		DDA3937_RS20840	0.75	-0.0
4,736,780	-		DDA3937_RS20840	0.77	-0.5
4,736,780	-		DDA3937_RS20840	0.77	-1.8
4,736,786	+		DDA3937_RS20840	0.77	-0.8
4,736,787	-		DDA3937_RS20840	0.77	+0.5
4,736,788	+		DDA3937_RS20840	0.78	-0.8
4,736,789	-		DDA3937_RS20840	0.78	+0.2
4,736,789	-		DDA3937_RS20840	0.78	-0.9
4,736,789	-		DDA3937_RS20840	0.78	+0.0
4,736,789	-		DDA3937_RS20840	0.78	-0.6
4,736,789	-		DDA3937_RS20840	0.78	-0.1
4,736,812	-		DDA3937_RS20840	0.80	-1.6