Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20780

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,721,365	-		DDA3937_RS20775	0.22	+1.0
4,721,365	-		DDA3937_RS20775	0.22	+1.4
4,721,379	+		DDA3937_RS20775	0.23	-0.4
4,721,379	+		DDA3937_RS20775	0.23	-0.3
4,721,379	+		DDA3937_RS20775	0.23	-0.3
4,721,379	+		DDA3937_RS20775	0.23	+1.9
4,721,379	+		DDA3937_RS20775	0.23	+0.6
4,721,379	+		DDA3937_RS20775	0.23	+0.2
4,721,380	-		DDA3937_RS20775	0.23	-1.0
4,721,380	-		DDA3937_RS20775	0.23	+0.3
4,721,380	-		DDA3937_RS20775	0.23	-0.6
4,721,608	-		DDA3937_RS20775	0.43	-0.2
4,721,608	-		DDA3937_RS20775	0.43	-0.1
4,721,608	-		DDA3937_RS20775	0.43	+0.3
4,722,198	+				+0.3
4,722,198	+				-0.9
4,722,199	-				+0.2
4,722,231	-				-0.9
4,722,252	+				+0.6
4,722,252	+				-0.6
4,722,252	+				+0.3
4,722,252	+				-0.0
4,722,252	+				+0.5
4,722,252	+				-0.6
4,722,252	+				-0.6
4,722,253	-				+0.1
4,722,253	-				+0.5
4,722,253	-				-0.2
4,722,253	-				+1.2
4,722,293	+				-0.7
4,722,504	+		DDA3937_RS20780	0.41	-0.1
4,722,504	+		DDA3937_RS20780	0.41	-0.9
4,722,517	+		DDA3937_RS20780	0.44	-0.3
4,722,517	+		DDA3937_RS20780	0.44	-0.3
4,722,517	+		DDA3937_RS20780	0.44	+0.5
4,722,518	-		DDA3937_RS20780	0.44	-0.8
4,722,523	+		DDA3937_RS20780	0.45	-0.7
4,722,574	+		DDA3937_RS20780	0.57	+0.3
4,722,575	-		DDA3937_RS20780	0.57	+0.2
4,722,575	-		DDA3937_RS20780	0.57	+0.9
4,722,652	-		DDA3937_RS20780	0.74	+1.2
4,722,682	+		DDA3937_RS20780	0.81	+0.0
4,722,705	+		DDA3937_RS20780	0.86	+0.8
4,722,783	+				+1.3
4,722,822	+				-0.2
4,722,822	+				-0.5
4,722,823	-				-0.2
4,722,823	-				-0.9
4,722,823	-				-0.4
4,722,827	-				-0.9
4,722,827	-				+0.3
4,722,827	-				+0.1
4,722,827	-				+0.1
4,722,840	+				+1.2
4,722,840	+				-0.6
4,722,841	-				+0.4
4,722,841	-				+0.3
4,722,858	+				-0.4
4,722,858	+				-0.4
4,722,859	-				-0.7
4,722,876	+				+1.3
4,722,877	-				+0.3
4,722,879	+				-0.0
4,722,879	+				-1.2
4,722,879	+				-0.6
4,722,879	+				+0.4
4,722,879	+				-0.1
4,722,880	-				-0.4
4,722,880	-				+0.1
4,722,897	+				-0.4
4,722,897	+				-0.0
4,722,898	-				+0.3
4,722,898	-				+0.3
4,722,905	-				+0.6
4,722,920	+				-0.3
4,722,921	-				-1.3
4,722,921	-				+1.5
4,722,921	-				-0.1
4,722,921	-				-0.4
4,722,921	-				-0.2
4,722,924	+				+0.0
4,722,924	+				-0.9
4,722,924	+				+0.2
4,722,925	-				+0.0
4,722,925	-				+1.0
4,722,925	-				-0.1
4,722,925	-				+0.5
4,722,925	-				-0.7
4,722,938	+				-0.4
4,722,938	+				+0.3
4,723,004	+				-0.9
4,723,004	+				-0.6
4,723,004	+				-1.0
4,723,004	+				-0.3
4,723,004	+				-2.0
4,723,005	-				+0.1
4,723,005	-				-0.1
4,723,023	-				+0.1
4,723,046	+				-0.3
4,723,046	+				+0.5
4,723,046	+				-0.3
4,723,046	+				-0.5
4,723,047	-				-0.1
4,723,047	-				+0.3
4,723,047	-				+0.7
4,723,379	+		DDA3937_RS20785	0.41	+0.0
4,723,379	+		DDA3937_RS20785	0.41	-0.0
4,723,379	+		DDA3937_RS20785	0.41	-0.7
4,723,380	-		DDA3937_RS20785	0.41	+2.5
4,723,412	+		DDA3937_RS20785	0.45	-1.1
4,723,412	+		DDA3937_RS20785	0.45	-0.2
4,723,412	+		DDA3937_RS20785	0.45	-0.9
4,723,413	-		DDA3937_RS20785	0.45	+0.3
4,723,413	-		DDA3937_RS20785	0.45	-0.3
4,723,537	+		DDA3937_RS20785	0.58	+0.1
4,723,560	+		DDA3937_RS20785	0.61	-0.5
4,723,560	+		DDA3937_RS20785	0.61	-0.2
4,723,561	-		DDA3937_RS20785	0.61	+0.2
4,723,561	-		DDA3937_RS20785	0.61	-1.0
4,723,561	-		DDA3937_RS20785	0.61	-0.3
4,723,561	-		DDA3937_RS20785	0.61	+0.1
4,723,612	+		DDA3937_RS20785	0.66	-0.5
4,723,612	+		DDA3937_RS20785	0.66	-0.0
4,723,612	+		DDA3937_RS20785	0.66	-0.1
4,723,613	-		DDA3937_RS20785	0.66	-0.0
4,723,613	-		DDA3937_RS20785	0.66	-1.9
4,723,613	-		DDA3937_RS20785	0.66	-0.5
4,723,613	-		DDA3937_RS20785	0.66	-0.8
4,723,613	-		DDA3937_RS20785	0.66	-0.6
4,723,613	-		DDA3937_RS20785	0.66	+0.6
4,723,613	-		DDA3937_RS20785	0.66	+1.1
4,723,613	-		DDA3937_RS20785	0.66	-1.9
4,723,613	-		DDA3937_RS20785	0.66	-0.6
4,723,613	-		DDA3937_RS20785	0.66	-0.9
4,723,613	-		DDA3937_RS20785	0.66	-0.4
4,723,614	+		DDA3937_RS20785	0.66	+0.0
4,723,677	+		DDA3937_RS20785	0.73	+0.6
4,723,677	+		DDA3937_RS20785	0.73	+0.7
4,723,677	+		DDA3937_RS20785	0.73	+0.2
4,723,677	+		DDA3937_RS20785	0.73	+0.1
4,723,677	+		DDA3937_RS20785	0.73	-0.7
4,723,678	-		DDA3937_RS20785	0.73	-0.8
4,723,698	+		DDA3937_RS20785	0.76	+1.9
4,723,699	-		DDA3937_RS20785	0.76	+0.0
4,723,707	+		DDA3937_RS20785	0.77	+0.9
4,723,707	+		DDA3937_RS20785	0.77	+0.3
4,723,707	+		DDA3937_RS20785	0.77	+0.9
4,723,707	+		DDA3937_RS20785	0.77	+0.4
4,723,707	+		DDA3937_RS20785	0.77	+1.5
4,723,707	+		DDA3937_RS20785	0.77	+0.6
4,723,707	+		DDA3937_RS20785	0.77	+1.1
4,723,708	-		DDA3937_RS20785	0.77	-0.2
4,723,708	-		DDA3937_RS20785	0.77	-0.6
4,723,708	-		DDA3937_RS20785	0.77	+0.3