Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS20765 and DDA3937_RS20770 are separated by 97 nucleotides DDA3937_RS20770 and DDA3937_RS20775 overlap by 4 nucleotides
DDA3937_RS20765: DDA3937_RS20765 - AMP-binding protein, at 4,719,072 to 4,720,595
_RS20765
DDA3937_RS20770: DDA3937_RS20770 - VOC family protein, at 4,720,693 to 4,721,124
_RS20770
DDA3937_RS20775: DDA3937_RS20775 - acyl-CoA dehydrogenase, at 4,721,121 to 4,722,254
_RS20775
Position (kb) 4720
4721
4722 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4719.719 kb on + strand, within DDA3937_RS20765 at 4719.720 kb on - strand, within DDA3937_RS20765 at 4719.720 kb on - strand, within DDA3937_RS20765 at 4719.723 kb on - strand, within DDA3937_RS20765 at 4719.788 kb on + strand, within DDA3937_RS20765 at 4719.810 kb on - strand, within DDA3937_RS20765 at 4719.810 kb on - strand, within DDA3937_RS20765 at 4719.853 kb on + strand, within DDA3937_RS20765 at 4719.945 kb on + strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.946 kb on - strand, within DDA3937_RS20765 at 4719.982 kb on + strand, within DDA3937_RS20765 at 4719.983 kb on - strand, within DDA3937_RS20765 at 4720.015 kb on + strand, within DDA3937_RS20765 at 4720.016 kb on - strand, within DDA3937_RS20765 at 4720.144 kb on - strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.147 kb on + strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.148 kb on - strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.200 kb on + strand, within DDA3937_RS20765 at 4720.204 kb on - strand, within DDA3937_RS20765 at 4720.204 kb on - strand, within DDA3937_RS20765 at 4720.224 kb on + strand, within DDA3937_RS20765 at 4720.268 kb on + strand, within DDA3937_RS20765 at 4720.269 kb on - strand, within DDA3937_RS20765 at 4720.277 kb on + strand, within DDA3937_RS20765 at 4720.277 kb on + strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.278 kb on - strand, within DDA3937_RS20765 at 4720.290 kb on - strand, within DDA3937_RS20765 at 4720.342 kb on + strand, within DDA3937_RS20765 at 4720.376 kb on + strand, within DDA3937_RS20765 at 4720.377 kb on - strand, within DDA3937_RS20765 at 4720.393 kb on + strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.394 kb on - strand, within DDA3937_RS20765 at 4720.399 kb on + strand, within DDA3937_RS20765 at 4720.399 kb on + strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.400 kb on - strand, within DDA3937_RS20765 at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.476 kb on + strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.477 kb on - strand at 4720.593 kb on + strand at 4720.594 kb on - strand at 4720.594 kb on - strand at 4720.594 kb on - strand at 4720.634 kb on + strand at 4720.657 kb on + strand at 4720.658 kb on - strand at 4720.666 kb on - strand at 4720.741 kb on - strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.810 kb on + strand, within DDA3937_RS20770 at 4720.811 kb on - strand, within DDA3937_RS20770 at 4720.811 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.051 kb on - strand, within DDA3937_RS20770 at 4721.131 kb on - strand at 4721.131 kb on - strand at 4721.131 kb on - strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.206 kb on + strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.207 kb on - strand at 4721.210 kb on + strand at 4721.210 kb on + strand at 4721.210 kb on + strand at 4721.211 kb on - strand at 4721.211 kb on - strand at 4721.245 kb on - strand, within DDA3937_RS20775 at 4721.267 kb on + strand, within DDA3937_RS20775 at 4721.268 kb on - strand, within DDA3937_RS20775 at 4721.268 kb on - strand, within DDA3937_RS20775 at 4721.365 kb on - strand, within DDA3937_RS20775 at 4721.365 kb on - strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.379 kb on + strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.380 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775 at 4721.608 kb on - strand, within DDA3937_RS20775
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,719,719 + DDA3937_RS20765 0.42 +0.4 4,719,720 - DDA3937_RS20765 0.43 +0.5 4,719,720 - DDA3937_RS20765 0.43 -0.4 4,719,723 - DDA3937_RS20765 0.43 +0.5 4,719,788 + DDA3937_RS20765 0.47 +0.0 4,719,810 - DDA3937_RS20765 0.48 +0.0 4,719,810 - DDA3937_RS20765 0.48 -0.2 4,719,853 + DDA3937_RS20765 0.51 -0.3 4,719,945 + DDA3937_RS20765 0.57 +0.3 4,719,946 - DDA3937_RS20765 0.57 -0.1 4,719,946 - DDA3937_RS20765 0.57 +1.5 4,719,946 - DDA3937_RS20765 0.57 +0.4 4,719,982 + DDA3937_RS20765 0.60 +0.0 4,719,983 - DDA3937_RS20765 0.60 +1.6 4,720,015 + DDA3937_RS20765 0.62 +0.5 4,720,016 - DDA3937_RS20765 0.62 +0.6 4,720,144 - DDA3937_RS20765 0.70 -0.0 4,720,147 + DDA3937_RS20765 0.71 +0.9 4,720,147 + DDA3937_RS20765 0.71 +0.0 4,720,147 + DDA3937_RS20765 0.71 -0.9 4,720,148 - DDA3937_RS20765 0.71 +0.8 4,720,148 - DDA3937_RS20765 0.71 +0.1 4,720,148 - DDA3937_RS20765 0.71 +0.8 4,720,148 - DDA3937_RS20765 0.71 -0.0 4,720,200 + DDA3937_RS20765 0.74 -1.6 4,720,200 + DDA3937_RS20765 0.74 -0.3 4,720,200 + DDA3937_RS20765 0.74 -0.2 4,720,200 + DDA3937_RS20765 0.74 -0.7 4,720,200 + DDA3937_RS20765 0.74 +0.4 4,720,204 - DDA3937_RS20765 0.74 -1.3 4,720,204 - DDA3937_RS20765 0.74 -0.6 4,720,224 + DDA3937_RS20765 0.76 -0.0 4,720,268 + DDA3937_RS20765 0.78 -0.3 4,720,269 - DDA3937_RS20765 0.79 +0.7 4,720,277 + DDA3937_RS20765 0.79 +1.2 4,720,277 + DDA3937_RS20765 0.79 -0.6 4,720,278 - DDA3937_RS20765 0.79 -0.3 4,720,278 - DDA3937_RS20765 0.79 -0.5 4,720,278 - DDA3937_RS20765 0.79 +0.6 4,720,278 - DDA3937_RS20765 0.79 -2.1 4,720,290 - DDA3937_RS20765 0.80 +0.0 4,720,342 + DDA3937_RS20765 0.83 -0.1 4,720,376 + DDA3937_RS20765 0.86 +1.1 4,720,377 - DDA3937_RS20765 0.86 -0.9 4,720,393 + DDA3937_RS20765 0.87 +0.3 4,720,394 - DDA3937_RS20765 0.87 +1.3 4,720,394 - DDA3937_RS20765 0.87 +0.9 4,720,394 - DDA3937_RS20765 0.87 -1.2 4,720,399 + DDA3937_RS20765 0.87 +1.7 4,720,399 + DDA3937_RS20765 0.87 +0.2 4,720,400 - DDA3937_RS20765 0.87 +0.5 4,720,400 - DDA3937_RS20765 0.87 +0.7 4,720,400 - DDA3937_RS20765 0.87 -0.1 4,720,476 + +0.6 4,720,476 + -2.1 4,720,476 + +1.6 4,720,476 + -0.1 4,720,477 - -0.3 4,720,477 - +0.6 4,720,477 - +0.1 4,720,477 - -0.2 4,720,477 - -0.2 4,720,593 + -1.0 4,720,594 - -0.1 4,720,594 - +0.2 4,720,594 - -0.1 4,720,634 + -0.5 4,720,657 + -1.7 4,720,658 - -1.0 4,720,666 - -0.6 4,720,741 - DDA3937_RS20770 0.11 +0.1 4,720,810 + DDA3937_RS20770 0.27 -1.0 4,720,810 + DDA3937_RS20770 0.27 +0.0 4,720,810 + DDA3937_RS20770 0.27 -0.3 4,720,810 + DDA3937_RS20770 0.27 -0.9 4,720,811 - DDA3937_RS20770 0.27 +0.4 4,720,811 - DDA3937_RS20770 0.27 +0.3 4,721,051 - DDA3937_RS20770 0.83 -0.1 4,721,051 - DDA3937_RS20770 0.83 -0.1 4,721,051 - DDA3937_RS20770 0.83 -1.9 4,721,131 - -0.2 4,721,131 - -0.4 4,721,131 - +0.5 4,721,206 + -0.4 4,721,206 + +0.0 4,721,206 + -0.0 4,721,206 + -1.6 4,721,206 + +0.2 4,721,206 + -0.2 4,721,207 - -0.2 4,721,207 - +0.0 4,721,207 - -0.4 4,721,207 - +0.4 4,721,207 - -2.1 4,721,207 - +1.2 4,721,207 - -0.0 4,721,210 + -1.2 4,721,210 + -1.2 4,721,210 + +2.3 4,721,211 - +0.6 4,721,211 - +0.3 4,721,245 - DDA3937_RS20775 0.11 +0.4 4,721,267 + DDA3937_RS20775 0.13 +0.3 4,721,268 - DDA3937_RS20775 0.13 +0.6 4,721,268 - DDA3937_RS20775 0.13 +1.0 4,721,365 - DDA3937_RS20775 0.22 +1.0 4,721,365 - DDA3937_RS20775 0.22 +1.4 4,721,379 + DDA3937_RS20775 0.23 -0.4 4,721,379 + DDA3937_RS20775 0.23 -0.3 4,721,379 + DDA3937_RS20775 0.23 -0.3 4,721,379 + DDA3937_RS20775 0.23 +1.9 4,721,379 + DDA3937_RS20775 0.23 +0.6 4,721,379 + DDA3937_RS20775 0.23 +0.2 4,721,380 - DDA3937_RS20775 0.23 -1.0 4,721,380 - DDA3937_RS20775 0.23 +0.3 4,721,380 - DDA3937_RS20775 0.23 -0.6 4,721,608 - DDA3937_RS20775 0.43 -0.2 4,721,608 - DDA3937_RS20775 0.43 -0.1 4,721,608 - DDA3937_RS20775 0.43 +0.3
Or see this region's nucleotide sequence