Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20625

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,691,017	+				+0.3
4,691,018	-				-0.3
4,691,219	+		DDA3937_RS20620	0.22	-0.5
4,691,220	-		DDA3937_RS20620	0.23	-1.3
4,691,220	-		DDA3937_RS20620	0.23	-0.9
4,691,238	-		DDA3937_RS20620	0.25	-0.2
4,691,362	-		DDA3937_RS20620	0.38	-0.6
4,691,499	-		DDA3937_RS20620	0.53	+0.2
4,691,499	-		DDA3937_RS20620	0.53	+0.5
4,691,629	+		DDA3937_RS20620	0.68	+0.4
4,691,712	+		DDA3937_RS20620	0.77	+0.6
4,691,712	+		DDA3937_RS20620	0.77	+1.1
4,691,712	+		DDA3937_RS20620	0.77	-0.6
4,691,713	-		DDA3937_RS20620	0.77	+0.4
4,691,734	+		DDA3937_RS20620	0.80	-0.4
4,691,734	+		DDA3937_RS20620	0.80	+0.0
4,691,735	-		DDA3937_RS20620	0.80	-0.2
4,691,786	+		DDA3937_RS20620	0.85	-0.5
4,691,786	+		DDA3937_RS20620	0.85	-0.2
4,691,787	-		DDA3937_RS20620	0.85	+0.1
4,691,787	-		DDA3937_RS20620	0.85	+0.0
4,691,787	-		DDA3937_RS20620	0.85	-2.0
4,691,787	-		DDA3937_RS20620	0.85	-0.4
4,691,909	-				-0.0
4,691,909	-				-0.7
4,691,951	-				+0.4
4,691,976	+				+0.4
4,691,976	+				-2.2
4,691,976	+				-1.1
4,691,977	-				-0.1
4,691,977	-				+0.5
4,691,977	-				+0.1
4,691,977	-				+0.3
4,692,048	+		DDA3937_RS20625	0.13	+0.2
4,692,049	-		DDA3937_RS20625	0.13	-1.2
4,692,049	-		DDA3937_RS20625	0.13	+0.4
4,692,114	+		DDA3937_RS20625	0.20	+0.0
4,692,115	-		DDA3937_RS20625	0.20	-0.0
4,692,115	-		DDA3937_RS20625	0.20	-2.0
4,692,115	-		DDA3937_RS20625	0.20	-0.1
4,692,251	-		DDA3937_RS20625	0.33	+0.5
4,692,270	+		DDA3937_RS20625	0.35	+0.1
4,692,270	+		DDA3937_RS20625	0.35	-0.7
4,692,270	+		DDA3937_RS20625	0.35	-1.1
4,692,270	+		DDA3937_RS20625	0.35	-1.8
4,692,271	-		DDA3937_RS20625	0.35	+0.0
4,692,271	-		DDA3937_RS20625	0.35	-0.8
4,692,271	-		DDA3937_RS20625	0.35	-1.5
4,692,343	-		DDA3937_RS20625	0.42	-0.4
4,692,717	+		DDA3937_RS20625	0.79	-1.7
4,692,717	+		DDA3937_RS20625	0.79	-0.6
4,692,767	+		DDA3937_RS20625	0.84	-0.9
4,692,768	-		DDA3937_RS20625	0.84	+0.6
4,692,833	-				-0.1
4,692,833	-				-0.0
4,692,833	-				-0.3
4,692,833	-				-0.1
4,692,835	+				-2.1
4,692,835	+				+0.3
4,692,835	+				-0.8
4,692,836	-				+0.0
4,692,898	+				-0.4
4,692,917	+				-0.2
4,692,947	+				-0.4
4,692,994	-				+0.3
4,692,994	-				-1.9
4,693,074	-				-1.2
4,693,241	+		DDA3937_RS20630	0.20	+0.4
4,693,241	+		DDA3937_RS20630	0.20	-1.4
4,693,241	+		DDA3937_RS20630	0.20	+0.2
4,693,242	-		DDA3937_RS20630	0.20	+0.3
4,693,242	-		DDA3937_RS20630	0.20	-0.2
4,693,401	-		DDA3937_RS20630	0.30	+0.5
4,693,413	+		DDA3937_RS20630	0.31	-0.9
4,693,414	-		DDA3937_RS20630	0.31	+0.0
4,693,414	-		DDA3937_RS20630	0.31	+1.7
4,693,577	+		DDA3937_RS20630	0.41	+1.0
4,693,578	-		DDA3937_RS20630	0.41	+0.6
4,693,638	+		DDA3937_RS20630	0.45	+0.1
4,693,639	-		DDA3937_RS20630	0.45	-1.0
4,693,688	+		DDA3937_RS20630	0.48	-0.4
4,693,688	+		DDA3937_RS20630	0.48	-0.6
4,693,688	+		DDA3937_RS20630	0.48	+0.1
4,693,688	+		DDA3937_RS20630	0.48	-0.2
4,693,688	+		DDA3937_RS20630	0.48	+0.1
4,693,689	-		DDA3937_RS20630	0.48	+0.7
4,693,689	-		DDA3937_RS20630	0.48	+0.1
4,693,689	-		DDA3937_RS20630	0.48	+0.5
4,693,689	-		DDA3937_RS20630	0.48	-1.3
4,693,689	-				+0.7
4,693,816	-		DDA3937_RS20630	0.56	+0.0