Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19300

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,392,096	+				+0.0
4,392,127	+				-0.7
4,392,214	+		DDA3937_RS19295	0.13	-1.7
4,392,214	+		DDA3937_RS19295	0.13	+0.4
4,392,215	-		DDA3937_RS19295	0.13	+0.5
4,392,287	+		DDA3937_RS19295	0.28	-0.4
4,392,287	+		DDA3937_RS19295	0.28	-0.1
4,392,287	+		DDA3937_RS19295	0.28	-0.1
4,392,287	+		DDA3937_RS19295	0.28	-0.4
4,392,288	-		DDA3937_RS19295	0.28	-0.6
4,392,288	-		DDA3937_RS19295	0.28	-2.2
4,392,288	-		DDA3937_RS19295	0.28	+0.4
4,392,288	-		DDA3937_RS19295	0.28	-0.2
4,392,288	-		DDA3937_RS19295	0.28	-0.5
4,392,308	+		DDA3937_RS19295	0.32	-1.3
4,392,309	-		DDA3937_RS19295	0.33	-1.7
4,392,309	-		DDA3937_RS19295	0.33	+0.4
4,392,309	-		DDA3937_RS19295	0.33	-0.7
4,392,379	+		DDA3937_RS19295	0.47	-0.1
4,392,379	+		DDA3937_RS19295	0.47	-0.7
4,392,380	-		DDA3937_RS19295	0.48	-0.5
4,392,380	-		DDA3937_RS19295	0.48	+0.3
4,392,380	-				+1.6
4,392,421	-				+0.6
4,392,454	-		DDA3937_RS19295	0.63	+0.2
4,392,455	+		DDA3937_RS19295	0.64	-0.7
4,392,455	+		DDA3937_RS19295	0.64	-0.3
4,392,456	-		DDA3937_RS19295	0.64	-0.0
4,392,456	-		DDA3937_RS19295	0.64	-0.6
4,392,456	-		DDA3937_RS19295	0.64	-0.8
4,392,494	+		DDA3937_RS19295	0.72	+0.2
4,392,494	+		DDA3937_RS19295	0.72	-0.4
4,392,494	+		DDA3937_RS19295	0.72	-0.2
4,392,494	+		DDA3937_RS19295	0.72	+1.3
4,392,495	-		DDA3937_RS19295	0.72	-0.3
4,392,495	-		DDA3937_RS19295	0.72	+0.0
4,392,495	-		DDA3937_RS19295	0.72	-0.4
4,392,495	-		DDA3937_RS19295	0.72	-2.1
4,392,495	-		DDA3937_RS19295	0.72	-0.1
4,392,495	-		DDA3937_RS19295	0.72	-1.0
4,392,554	+		DDA3937_RS19295	0.84	-1.0
4,392,603	+				-2.2
4,392,604	-				-0.6
4,392,615	+				-1.0
4,392,652	+				-0.4
4,392,662	-				+0.5
4,392,696	+				+0.1
4,392,704	-				+1.8
4,392,714	-				+0.0
4,392,715	+				+0.5
4,392,776	+		DDA3937_RS19300	0.38	-1.5
4,392,777	-		DDA3937_RS19300	0.38	+0.0
4,392,777	-		DDA3937_RS19300	0.38	-0.1
4,392,811	-		DDA3937_RS19300	0.56	-0.9
4,392,811	-		DDA3937_RS19300	0.56	-0.9
4,392,811	-		DDA3937_RS19300	0.56	-0.5
4,392,858	-		DDA3937_RS19300	0.80	-0.3
4,392,892	+				-0.2
4,392,892	+				+1.0
4,392,892	+				-1.1
4,392,892	+				-1.2
4,392,892	+				+1.6
4,392,892	+				-0.4
4,392,892	+				+0.7
4,392,892	+				+0.6
4,392,892	+				-0.4
4,392,892	+				-0.7
4,392,892	+				-0.2
4,392,892	+				-1.0
4,392,892	+				+0.2
4,392,892	+				-0.1
4,392,892	+				+0.8
4,392,892	+				+1.1
4,392,892	+				-0.8
4,392,892	+				-0.9
4,392,892	+				+1.1
4,392,892	+				-1.3
4,392,892	+				+0.1
4,392,892	+				-1.0
4,392,892	+				+0.6
4,392,892	+				-1.7
4,392,892	+				-0.6
4,392,892	+				+0.6
4,392,892	+				-0.8
4,392,892	+				+0.9
4,392,892	+				-2.2
4,392,892	+				-0.5
4,392,892	+				+0.4
4,392,892	+				+2.3
4,392,892	+				-0.8
4,392,892	+				-0.4
4,392,892	+				-1.0
4,392,892	+				+0.9
4,392,892	+				-0.1
4,392,892	+				+0.0
4,392,892	+				+0.1
4,392,892	+				+0.0
4,392,892	+				+0.1
4,392,892	+				-0.2
4,392,892	+				-2.6
4,392,892	+				-1.1
4,392,892	+				-1.4
4,392,892	+				+0.0
4,392,892	+				-0.4
4,392,892	+				+0.8
4,392,892	+				+1.5
4,392,892	+				+0.3
4,392,892	+				-0.8
4,392,892	+				-0.8
4,392,892	+				+0.1
4,392,892	+				+0.1
4,392,892	+				-0.2
4,392,893	-				+1.1
4,392,893	-				-0.7
4,392,893	-				-0.4
4,392,893	-				-0.4
4,392,893	-				-0.2
4,392,893	-				+1.6
4,392,893	-				+0.4
4,392,893	-				+0.7
4,392,893	-				-0.1
4,392,893	-				+0.0
4,392,893	-				-0.2
4,392,893	-				-0.5
4,392,893	-				-0.1
4,392,893	-				-0.2
4,392,893	-				-0.0
4,392,893	-				-1.4
4,392,893	-				-1.0
4,392,893	-				-1.0
4,392,893	-				+0.0
4,392,893	-				-0.2
4,392,893	-				-0.1
4,392,893	-				-0.2
4,392,893	-				-0.6
4,392,893	-				+0.6
4,392,893	-				+0.2
4,392,893	-				+0.4
4,392,893	-				-1.0
4,392,893	-				-1.7
4,392,893	-				+0.0
4,392,893	-				+0.6
4,392,893	-				+0.3
4,392,893	-				-0.1
4,392,893	-				-1.2
4,392,893	-				+0.5
4,392,893	-				+0.4
4,392,893	-				+0.4
4,392,893	-				+0.3
4,392,893	-				-0.9
4,392,893	-				-0.1
4,392,893	-				-1.4
4,392,893	-				-1.4
4,392,893	-				-0.1
4,392,893	-				-0.0
4,392,893	-				+0.0
4,392,893	-				-0.5
4,392,893	-				+1.8
4,392,893	-				+0.6
4,392,893	-				+0.5
4,392,893	-				-1.1
4,392,893	-				+0.1
4,392,893	-				+1.1
4,392,893	-				+0.9
4,392,893	-				-2.9
4,392,893	-				-0.3
4,392,893	-				+0.2
4,392,893	-				-1.0
4,392,893	-				-0.7
4,392,893	-				-0.6
4,392,893	-				+1.0
4,392,893	-				-0.4
4,392,893	-				+0.9
4,392,893	-				-0.1
4,392,893	-				-0.1
4,392,893	-				+0.2
4,392,893	-				+0.1
4,392,896	+				-0.1
4,392,896	+				-0.1
4,392,896	+				+0.2
4,392,897	-				-0.5
4,392,897	-				-0.1
4,392,897	-				-1.0
4,392,897	-				+0.4
4,392,897	-				+0.0
4,392,897	-				-0.1
4,392,897	-				+1.4
4,392,936	-				+0.2
4,393,013	+				+0.9
4,393,013	+				-1.0
4,393,013	+				+0.3
4,393,013	+				-1.0
4,393,013	+				+0.3
4,393,014	-				-1.0
4,393,028	-				-0.1
4,393,558	-		DDA3937_RS19305	0.45	-1.7