Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,290,454	+		DDA3937_RS14345	0.40	+2.0
3,290,499	+		DDA3937_RS14345	0.44	-0.4
3,290,516	+		DDA3937_RS14345	0.45	+0.5
3,290,518	+		DDA3937_RS14345	0.45	-0.1
3,290,518	+		DDA3937_RS14345	0.45	-0.5
3,290,518	+		DDA3937_RS14345	0.45	-0.5
3,290,518	+		DDA3937_RS14345	0.45	+0.1
3,290,518	+		DDA3937_RS14345	0.45	-2.4
3,290,518	+		DDA3937_RS14345	0.45	-0.2
3,290,519	-		DDA3937_RS14345	0.46	+0.2
3,290,519	-		DDA3937_RS14345	0.46	-0.1
3,290,519	-		DDA3937_RS14345	0.46	-1.2
3,290,519	-		DDA3937_RS14345	0.46	+1.0
3,290,565	+		DDA3937_RS14345	0.49	-0.3
3,290,593	+		DDA3937_RS14345	0.52	-0.2
3,290,657	+		DDA3937_RS14345	0.57	+0.1
3,290,884	+		DDA3937_RS14345	0.76	+0.8
3,290,884	+		DDA3937_RS14345	0.76	-0.9
3,290,884	+		DDA3937_RS14345	0.76	-0.5
3,290,885	-		DDA3937_RS14345	0.76	-0.1
3,290,962	+		DDA3937_RS14345	0.82	-0.5
3,290,962	+		DDA3937_RS14345	0.82	-0.4
3,290,962	+		DDA3937_RS14345	0.82	-0.2
3,290,962	+		DDA3937_RS14345	0.82	+0.1
3,290,963	-		DDA3937_RS14345	0.82	-0.2
3,290,963	-		DDA3937_RS14345	0.82	-0.1
3,290,963	-		DDA3937_RS14345	0.82	-1.2
3,290,963	-		DDA3937_RS14345	0.82	+1.7
3,290,963	-		DDA3937_RS14345	0.82	-0.6
3,290,963	-		DDA3937_RS14345	0.82	-0.2
3,290,963	-		DDA3937_RS14345	0.82	-0.1
3,291,307	+				-0.0
3,291,315	+				-0.8
3,291,315	+				-0.3
3,291,315	+				-3.6
3,291,316	-				-1.3
3,291,316	-				+0.1
3,291,331	+				-0.6
3,291,331	+				-0.4
3,291,331	+				-0.7
3,291,332	-				-0.0
3,291,332	-				-0.6
3,291,332	-				+1.7
3,291,332	-				-1.2
3,291,530	+		DDA3937_RS14350	0.33	-1.6
3,291,530	+		DDA3937_RS14350	0.33	-0.1
3,291,530	+		DDA3937_RS14350	0.33	+0.1
3,291,531	-		DDA3937_RS14350	0.33	+0.4
3,291,531	-		DDA3937_RS14350	0.33	+0.3
3,291,531	-		DDA3937_RS14350	0.33	+0.8
3,291,531	-		DDA3937_RS14350	0.33	+0.4
3,291,531	-		DDA3937_RS14350	0.33	+0.0
3,291,581	+		DDA3937_RS14350	0.41	-1.7
3,291,581	+		DDA3937_RS14350	0.41	-0.6
3,291,581	+		DDA3937_RS14350	0.41	+0.3
3,291,581	+		DDA3937_RS14350	0.41	-0.1
3,291,582	-		DDA3937_RS14350	0.42	+1.2
3,291,582	-		DDA3937_RS14350	0.42	+0.1
3,291,584	+		DDA3937_RS14350	0.42	+1.4
3,291,584	+		DDA3937_RS14350	0.42	+1.3
3,291,584	+		DDA3937_RS14350	0.42	-0.9
3,291,585	-		DDA3937_RS14350	0.42	-0.1
3,291,637	+		DDA3937_RS14350	0.51	+0.1
3,291,638	-		DDA3937_RS14350	0.51	+0.5
3,291,654	+		DDA3937_RS14350	0.54	+0.0
3,291,655	-		DDA3937_RS14350	0.54	+0.5
3,291,756	-		DDA3937_RS14350	0.71	+0.8
3,291,861	-		DDA3937_RS14350	0.88	+0.0
3,291,878	-				-0.4
3,291,878	-				-0.4
3,291,930	-				+0.3
3,292,121	+				+0.3
3,292,122	-				-0.7
3,292,192	+		DDA3937_RS14355	0.10	+1.2
3,292,316	+		DDA3937_RS14355	0.17	-1.4
3,292,316	+		DDA3937_RS14355	0.17	+0.1
3,292,316	+		DDA3937_RS14355	0.17	+0.1
3,292,316	+		DDA3937_RS14355	0.17	-1.3
3,292,316	+		DDA3937_RS14355	0.17	+0.1
3,292,316	+		DDA3937_RS14355	0.17	-0.7
3,292,316	+		DDA3937_RS14355	0.17	-1.1
3,292,316	+		DDA3937_RS14355	0.17	-0.7
3,292,317	-		DDA3937_RS14355	0.17	-0.1
3,292,317	-		DDA3937_RS14355	0.17	-0.1
3,292,317	-		DDA3937_RS14355	0.17	+0.3
3,292,317	-		DDA3937_RS14355	0.17	+0.9
3,292,317	-		DDA3937_RS14355	0.17	-1.6
3,292,317	-		DDA3937_RS14355	0.17	-0.9
3,292,317	-		DDA3937_RS14355	0.17	-0.3
3,292,317	-		DDA3937_RS14355	0.17	-0.4
3,292,317	-				+0.7
3,292,317	-		DDA3937_RS14355	0.17	+0.3
3,292,368	+		DDA3937_RS14355	0.20	-1.3
3,292,368	+		DDA3937_RS14355	0.20	-0.3
3,292,637	+		DDA3937_RS14355	0.35	+0.6
3,292,637	+		DDA3937_RS14355	0.35	-2.0
3,292,637	+		DDA3937_RS14355	0.35	+0.0
3,292,638	-		DDA3937_RS14355	0.35	+0.1
3,292,638	-				-0.9
3,292,660	-		DDA3937_RS14355	0.36	-0.6
3,292,670	+		DDA3937_RS14355	0.36	-0.0
3,292,671	-		DDA3937_RS14355	0.36	+0.6
3,292,695	+		DDA3937_RS14355	0.38	+1.8
3,292,696	-		DDA3937_RS14355	0.38	-1.1
3,292,696	-		DDA3937_RS14355	0.38	-0.3
3,292,696	-		DDA3937_RS14355	0.38	+0.1
3,292,888	+		DDA3937_RS14355	0.48	+0.0
3,292,888	+				-0.4
3,292,888	+		DDA3937_RS14355	0.48	-1.7
3,292,889	-		DDA3937_RS14355	0.48	-0.5