Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11760

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,673,067	-		DDA3937_RS11755	0.56	+0.2
2,673,198	+				-1.7
2,673,198	+		DDA3937_RS11755	0.66	-0.4
2,673,198	+		DDA3937_RS11755	0.66	+0.9
2,673,198	+		DDA3937_RS11755	0.66	-0.1
2,673,198	+		DDA3937_RS11755	0.66	+0.2
2,673,199	-		DDA3937_RS11755	0.66	+0.1
2,673,199	-		DDA3937_RS11755	0.66	-2.4
2,673,299	+		DDA3937_RS11755	0.73	+0.5
2,673,299	+		DDA3937_RS11755	0.73	-1.8
2,673,393	+		DDA3937_RS11755	0.79	-0.3
2,673,394	-		DDA3937_RS11755	0.80	+0.7
2,673,422	-		DDA3937_RS11755	0.81	-0.3
2,673,489	+		DDA3937_RS11755	0.86	+0.1
2,673,490	-		DDA3937_RS11755	0.86	-1.5
2,673,490	-		DDA3937_RS11755	0.86	+0.2
2,673,666	+				-3.4
2,673,666	+				-0.4
2,673,667	-				-0.7
2,673,667	-				-0.4
2,673,678	+				-0.6
2,673,679	-				+0.3
2,673,720	+				-0.4
2,673,720	+				-0.8
2,673,721	-				-0.4
2,673,721	-				+0.7
2,673,721	-				-0.1
2,673,721	-				-0.1
2,673,722	+				-1.1
2,673,723	-				+0.4
2,673,731	+				-0.1
2,673,756	-				+0.3
2,673,756	-				-0.3
2,673,953	+				-0.2
2,673,953	+				-0.2
2,673,953	+				-0.5
2,673,953	+				+0.4
2,673,953	+				-0.1
2,673,954	-				-1.9
2,673,954	-				+0.1
2,673,954	-				+0.5
2,673,954	-				-1.2
2,673,954	-				-1.4
2,673,954	-				-0.3
2,673,954	-				+0.8
2,673,958	-				-0.5
2,673,976	+				+0.0
2,673,976	+				-0.1
2,673,977	-				-0.1
2,673,977	-				-0.8
2,673,993	-				+0.5
2,674,008	+				-0.7
2,674,009	-				+0.0
2,674,010	+				-0.3
2,674,278	+		DDA3937_RS11760	0.34	-0.2
2,674,278	+		DDA3937_RS11760	0.34	+0.2
2,674,282	-		DDA3937_RS11760	0.35	+1.3
2,674,575	+		DDA3937_RS11760	0.78	+1.1
2,674,575	+		DDA3937_RS11760	0.78	+2.1
2,674,575	+		DDA3937_RS11760	0.78	+0.3
2,674,575	+		DDA3937_RS11760	0.78	-1.1
2,674,576	-		DDA3937_RS11760	0.78	+0.3
2,674,576	-		DDA3937_RS11760	0.78	+0.5
2,674,576	-		DDA3937_RS11760	0.78	-0.0
2,674,623	+		DDA3937_RS11760	0.85	-0.2
2,674,623	+		DDA3937_RS11760	0.85	+1.9
2,674,624	-		DDA3937_RS11760	0.85	-0.3
2,674,624	-				+1.1
2,674,645	-				+1.9
2,674,645	-		DDA3937_RS11760	0.89	+1.2
2,674,683	+				+0.0
2,674,683	+				+1.0
2,674,684	-				+0.7
2,674,714	+				-0.1
2,674,714	+				+0.1
2,674,714	+				-1.7
2,674,714	+				+0.1
2,674,714	+				-0.4
2,674,714	+				+0.1
2,674,715	-				-0.2
2,674,736	+				-0.5
2,674,736	+				+0.8
2,674,756	+				-2.0
2,674,756	+				+0.0
2,674,757	-				+0.0
2,674,959	-		DDA3937_RS11765	0.34	+1.2
2,675,030	+		DDA3937_RS11765	0.44	-0.1
2,675,030	+		DDA3937_RS11765	0.44	+0.6
2,675,030	+		DDA3937_RS11765	0.44	-0.3
2,675,042	+		DDA3937_RS11765	0.46	-1.3
2,675,043	-		DDA3937_RS11765	0.46	-0.9
2,675,044	+				+0.9
2,675,044	+		DDA3937_RS11765	0.47	+0.6
2,675,045	-		DDA3937_RS11765	0.47	-1.5
2,675,045	-		DDA3937_RS11765	0.47	-1.1
2,675,123	+		DDA3937_RS11765	0.58	+0.5
2,675,163	+		DDA3937_RS11765	0.64	-1.0
2,675,163	+		DDA3937_RS11765	0.64	-0.1
2,675,255	+		DDA3937_RS11765	0.78	+0.7
2,675,255	+		DDA3937_RS11765	0.78	-0.2
2,675,255	+		DDA3937_RS11765	0.78	+1.1
2,675,255	+		DDA3937_RS11765	0.78	+0.2
2,675,255	+		DDA3937_RS11765	0.78	+0.2
2,675,255	+				-2.1
2,675,255	+		DDA3937_RS11765	0.78	+0.7
2,675,255	+		DDA3937_RS11765	0.78	+0.2
2,675,256	-		DDA3937_RS11765	0.78	-0.4
2,675,256	-		DDA3937_RS11765	0.78	-0.8
2,675,256	-		DDA3937_RS11765	0.78	-2.2
2,675,256	-		DDA3937_RS11765	0.78	-0.1
2,675,256	-		DDA3937_RS11765	0.78	+0.2
2,675,285	+		DDA3937_RS11765	0.82	-0.5
2,675,324	+		DDA3937_RS11765	0.88	+1.1
2,675,325	-		DDA3937_RS11765	0.88	-0.2
2,675,325	-		DDA3937_RS11765	0.88	-0.7
2,675,325	-		DDA3937_RS11765	0.88	+0.4
2,675,325	-		DDA3937_RS11765	0.88	-0.7
2,675,325	-		DDA3937_RS11765	0.88	+0.0
2,675,428	+				+0.3
2,675,429	-				-1.1
2,675,474	-				-0.3
2,675,659	+		DDA3937_RS11770	0.27	+1.9
2,675,659	+		DDA3937_RS11770	0.27	-0.6
2,675,659	+		DDA3937_RS11770	0.27	-1.7