Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11240

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,553,065	+				+0.3
2,553,065	+				+0.4
2,553,065	+				-0.7
2,553,066	-				+0.2
2,553,084	-				-0.4
2,553,084	-				+1.9
2,553,112	+				-0.7
2,553,112	+				-0.7
2,553,112	+				-1.3
2,553,112	+				+0.1
2,553,112	+				+1.1
2,553,112	+				-0.8
2,553,112	+				+0.5
2,553,113	-				-0.1
2,553,113	-				+2.1
2,553,113	-				-2.0
2,553,113	-				+0.1
2,553,113	-				+0.5
2,553,113	-				+0.9
2,553,113	-				-1.7
2,553,114	+				-0.5
2,553,115	-				+2.4
2,553,149	+				-0.3
2,553,149	+				+0.4
2,553,150	-				+0.4
2,553,156	+				-1.1
2,553,156	+				-0.7
2,553,156	+				+0.0
2,553,156	+				+0.3
2,553,157	-				-1.3
2,553,179	+				-0.7
2,553,180	-				+0.3
2,553,180	-				-0.7
2,553,182	-				+0.5
2,553,924	-				+0.1
2,554,223	+		DDA3937_RS11240	0.14	-1.7
2,554,224	-		DDA3937_RS11240	0.15	+0.7
2,554,224	-		DDA3937_RS11240	0.15	+0.7
2,554,353	-		DDA3937_RS11240	0.21	-0.6
2,554,494	+		DDA3937_RS11240	0.29	-0.2
2,554,494	+		DDA3937_RS11240	0.29	-0.1
2,554,626	-		DDA3937_RS11240	0.35	-0.2
2,554,761	-		DDA3937_RS11240	0.42	-1.4
2,554,761	-		DDA3937_RS11240	0.42	-0.7
2,554,768	+		DDA3937_RS11240	0.43	-1.3
2,554,768	+		DDA3937_RS11240	0.43	+0.4
2,554,769	-		DDA3937_RS11240	0.43	-2.4
2,554,775	-		DDA3937_RS11240	0.43	+0.2
2,554,899	+		DDA3937_RS11240	0.50	-0.1
2,554,899	+		DDA3937_RS11240	0.50	-2.2
2,554,899	+		DDA3937_RS11240	0.50	-0.7
2,554,899	+		DDA3937_RS11240	0.50	-0.9
2,554,899	+		DDA3937_RS11240	0.50	-0.5
2,554,900	-		DDA3937_RS11240	0.50	+0.1
2,554,900	-		DDA3937_RS11240	0.50	-0.9
2,554,900	-		DDA3937_RS11240	0.50	+0.0
2,554,900	-		DDA3937_RS11240	0.50	+1.5
2,555,015	+		DDA3937_RS11240	0.56	+2.2
2,555,015	+		DDA3937_RS11240	0.56	-0.1
2,555,046	+		DDA3937_RS11240	0.57	-0.5
2,555,077	+		DDA3937_RS11240	0.59	-0.5
2,555,090	+		DDA3937_RS11240	0.60	-0.3
2,555,140	+		DDA3937_RS11240	0.62	-0.6
2,555,141	-		DDA3937_RS11240	0.62	-0.2
2,555,141	-		DDA3937_RS11240	0.62	+1.1
2,555,141	-		DDA3937_RS11240	0.62	+0.3
2,555,154	-		DDA3937_RS11240	0.63	-1.0
2,555,181	+				-0.7
2,555,182	-		DDA3937_RS11240	0.64	-1.0
2,555,182	-		DDA3937_RS11240	0.64	-1.3
2,555,182	-		DDA3937_RS11240	0.64	-0.8
2,555,248	+		DDA3937_RS11240	0.68	-0.1
2,555,248	+		DDA3937_RS11240	0.68	-0.1
2,555,249	-		DDA3937_RS11240	0.68	+0.1
2,555,249	-		DDA3937_RS11240	0.68	-0.5
2,555,249	-		DDA3937_RS11240	0.68	+0.2
2,555,249	-		DDA3937_RS11240	0.68	+0.6
2,555,249	-		DDA3937_RS11240	0.68	-0.1
2,555,249	-		DDA3937_RS11240	0.68	-0.6
2,555,415	-		DDA3937_RS11240	0.77	-3.4
2,555,533	+				+0.9
2,555,533	+		DDA3937_RS11240	0.83	+0.3
2,555,534	-		DDA3937_RS11240	0.83	-0.7
2,555,537	+		DDA3937_RS11240	0.83	+0.2
2,555,538	-		DDA3937_RS11240	0.83	-1.1
2,555,538	-		DDA3937_RS11240	0.83	-0.1
2,555,611	+		DDA3937_RS11240	0.87	+0.4
2,555,611	+		DDA3937_RS11240	0.87	+0.5
2,555,611	+		DDA3937_RS11240	0.87	-1.1
2,555,612	-		DDA3937_RS11240	0.87	+0.7
2,555,686	+				+0.2
2,555,687	-				+0.1
2,555,692	+				-0.8
2,556,006	+				-1.2
2,556,006	+				+0.2
2,556,007	-				+0.2
2,556,007	-				-3.3
2,556,007	-				-0.4
2,556,069	+				+0.8
2,556,087	+				+2.1
2,556,121	+		DDA3937_RS11245	0.15	-1.1
2,556,121	+		DDA3937_RS11245	0.15	-0.6
2,556,122	-		DDA3937_RS11245	0.15	+0.2
2,556,136	+		DDA3937_RS11245	0.19	-0.1
2,556,136	+		DDA3937_RS11245	0.19	-0.8
2,556,137	-		DDA3937_RS11245	0.19	-0.4
2,556,137	-		DDA3937_RS11245	0.19	-2.1
2,556,137	-		DDA3937_RS11245	0.19	-0.1
2,556,139	+		DDA3937_RS11245	0.20	-0.3
2,556,436	-				+0.9
2,556,436	-				+0.3
2,556,436	-				+0.2
2,556,457	+				+0.4
2,556,458	-				+1.5
2,556,467	-				+1.0
2,556,597	+		DDA3937_RS11250	0.69	-1.7
2,556,598	-		DDA3937_RS11250	0.69	-0.5
2,556,598	-		DDA3937_RS11250	0.69	+0.1
2,556,598	-		DDA3937_RS11250	0.69	-1.1
2,556,598	-		DDA3937_RS11250	0.69	-0.7
2,556,690	-				-2.1
2,556,718	-				-0.8
2,556,790	+				-1.1
2,556,797	+				-0.5
2,556,817	+				+1.3
2,556,822	+				-1.1
2,556,857	-				-0.4