Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11235

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,552,256	-				-0.1
2,552,271	+				+0.3
2,552,271	+				-2.1
2,552,271	+				+0.8
2,552,272	-				-0.2
2,552,272	-				+0.0
2,552,272	-				-0.3
2,552,316	-				-0.7
2,552,364	+				-0.1
2,552,365	-				-0.4
2,552,377	+				-0.1
2,552,395	-				-0.4
2,552,397	+				+1.1
2,552,397	+				-3.1
2,552,434	+				-1.1
2,552,434	+				-0.4
2,552,435	-				-0.1
2,552,627	+		DDA3937_RS11230	0.26	+0.6
2,552,628	-		DDA3937_RS11230	0.27	-0.8
2,552,628	-		DDA3937_RS11230	0.27	-0.1
2,552,653	+		DDA3937_RS11230	0.31	+1.0
2,552,653	+		DDA3937_RS11230	0.31	+0.1
2,552,653	+		DDA3937_RS11230	0.31	+0.4
2,552,653	+		DDA3937_RS11230	0.31	+1.3
2,552,653	+		DDA3937_RS11230	0.31	-0.3
2,552,653	+		DDA3937_RS11230	0.31	-0.8
2,552,654	-		DDA3937_RS11230	0.31	-0.2
2,552,654	-		DDA3937_RS11230	0.31	+1.2
2,552,654	-		DDA3937_RS11230	0.31	+0.8
2,552,654	-		DDA3937_RS11230	0.31	+0.1
2,552,654	-		DDA3937_RS11230	0.31	-1.8
2,552,654	-		DDA3937_RS11230	0.31	+0.2
2,552,697	-		DDA3937_RS11230	0.38	+0.2
2,552,706	+		DDA3937_RS11230	0.40	-0.3
2,552,761	+		DDA3937_RS11230	0.49	+0.1
2,552,762	-		DDA3937_RS11230	0.50	+0.1
2,552,762	-		DDA3937_RS11230	0.50	-1.4
2,552,762	-		DDA3937_RS11230	0.50	-0.2
2,552,908	+		DDA3937_RS11230	0.75	-1.1
2,552,908	+		DDA3937_RS11230	0.75	-1.3
2,553,065	+				+0.3
2,553,065	+				+0.4
2,553,065	+				-0.7
2,553,066	-				+0.2
2,553,084	-				-0.4
2,553,084	-				+1.9
2,553,112	+				-0.7
2,553,112	+				-0.7
2,553,112	+				-1.3
2,553,112	+				+0.1
2,553,112	+				+1.1
2,553,112	+				-0.8
2,553,112	+				+0.5
2,553,113	-				-0.1
2,553,113	-				+2.1
2,553,113	-				-2.0
2,553,113	-				+0.1
2,553,113	-				+0.5
2,553,113	-				+0.9
2,553,113	-				-1.7
2,553,114	+				-0.5
2,553,115	-				+2.4
2,553,149	+				-0.3
2,553,149	+				+0.4
2,553,150	-				+0.4
2,553,156	+				-1.1
2,553,156	+				-0.7
2,553,156	+				+0.0
2,553,156	+				+0.3
2,553,157	-				-1.3
2,553,179	+				-0.7
2,553,180	-				+0.3
2,553,180	-				-0.7
2,553,182	-				+0.5
2,553,924	-				+0.1
2,554,223	+		DDA3937_RS11240	0.14	-1.7
2,554,224	-		DDA3937_RS11240	0.15	+0.7
2,554,224	-		DDA3937_RS11240	0.15	+0.7
2,554,353	-		DDA3937_RS11240	0.21	-0.6
2,554,494	+		DDA3937_RS11240	0.29	-0.2
2,554,494	+		DDA3937_RS11240	0.29	-0.1
2,554,626	-		DDA3937_RS11240	0.35	-0.2
2,554,761	-		DDA3937_RS11240	0.42	-1.4
2,554,761	-		DDA3937_RS11240	0.42	-0.7
2,554,768	+		DDA3937_RS11240	0.43	-1.3
2,554,768	+		DDA3937_RS11240	0.43	+0.4
2,554,769	-		DDA3937_RS11240	0.43	-2.4
2,554,775	-		DDA3937_RS11240	0.43	+0.2